Gordonia alkanivorans: C5O27_13835
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Entry
C5O27_13835 CDS
T05876
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
gav
Gordonia alkanivorans
Pathway
gav00300
Lysine biosynthesis
gav00470
D-Amino acid metabolism
gav01100
Metabolic pathways
gav01110
Biosynthesis of secondary metabolites
gav01120
Microbial metabolism in diverse environments
gav01230
Biosynthesis of amino acids
Module
gav_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C5O27_13835
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C5O27_13835
Enzymes [BR:
gav01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
C5O27_13835
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AZZ82013
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All DBs
Position
3037547..3038449
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AA seq
300 aa
AA seq
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MRVSSHQTGLRFVKGHGTQNDFVVLADPAAELSLDAEMVAALCDRQRGIGADGLLRVART
GALVERGVLDALPDGVAADDWFMDYRNGDGSIAEMCGNGVRVFAHFVRATGLTDTDTFTV
GSRAGARPVTIHSFDDVHAEVTVETGVARLDGTSVVRIGDDIYPGVKVDVGNPHLACVVA
DLTADGLAAVDFTAGVVIEADGFPNGANVELLTPPVEDVDGRLYARMRVFERGVGETRSC
GTGLVAATRAALDARGQDTGELRIGIPGGEVTVTIRTDGSTLRGPSMLVADGVLRPGWDR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgtgagttctcatcagacgggtctgcgcttcgtcaagggccacggcacccagaac
gacttcgtcgtgctcgccgatccggccgccgagctgtcgctcgacgccgagatggtcgcg
gcactgtgcgaccggcagcggggcatcggtgccgacggtctgctgcgcgtggcgcgcacg
ggtgcgctcgtcgaacgcggcgtcctcgatgcactgccggacggcgtcgcggccgacgat
tggttcatggactaccgcaacggcgacggctcgatcgccgagatgtgcggcaacggcgtc
cgggtcttcgcccacttcgtccgcgcgaccggactcaccgacaccgacaccttcaccgtg
ggctcgcgtgccggagcccggcccgtgaccatccactccttcgacgacgtgcacgccgag
gtcaccgtggagacgggtgtcgcccgcctcgacggcacctcggtcgtgcgcatcggcgac
gacatctatccgggtgtcaaggtcgacgtcgggaacccgcacctggcgtgcgtggtcgcc
gacctcaccgccgacggcctcgcggctgtcgacttcaccgccggcgtggtcatcgaggcc
gacggcttcccgaacggggccaacgtcgagctgctcaccccgccggtcgaggacgtcgac
ggacgtctgtacgcgcggatgcgggtcttcgaacgcggcgtcggagagacgcgtagctgc
ggaacgggcctggtcgcggccacgcgcgccgccctcgacgcgcgcggccaggacaccggc
gagctgcgcatcggcatcccgggcggcgaggtcaccgtgacgatccggaccgacggctcg
accctgcgtggcccgtcgatgctggtcgccgacggcgtcctgcgaccgggctgggaccgc
tga
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