KEGG   Gordonia alkanivorans: C5O27_14565
Entry
C5O27_14565       CDS       T05876                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
gav  Gordonia alkanivorans
Pathway
gav00740  Riboflavin metabolism
gav01100  Metabolic pathways
gav01110  Biosynthesis of secondary metabolites
gav01240  Biosynthesis of cofactors
gav02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:gav00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    C5O27_14565 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C5O27_14565 (ribD)
Enzymes [BR:gav01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     C5O27_14565 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     C5O27_14565 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 Ldh_2 MafB19-deam
Other DBs
NCBI-ProteinID: AZZ82139
LinkDB
Position
3199910..3200935
AA seq 341 aa
MDIVAAMDRAVEASFAAMGVSSPNPPVGAVILTADGTVAGVGATQPPGGPHAEVMALRAA
GEAARGGTAIVTLEPCNHTGRTGPCSQALIEAGVVEVHYAVSDPNPVAAGGADTLRAAGI
RVTGGVAVDAVENGPLRPWLTRQRLGRPMVTAKIAAGIDGRIVAPDGTSQWITGPAARDH
AHQQRSRLDAIVIGTGTALADNPTLTARTADGGLYPHQPARVVLGHRDLPADANVRGDTG
GPLVCVDSHHPADVLSALPDALWVLVEGGPHILGAFFAADLVDEVHAYVAPMVLGAGRSS
VEIPGVTTLDDARRFETREVTTLGSDILIALDRSSRASAQD
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggacatcgtcgccgccatggaccgcgccgtcgaggcgtcgtttgcggccatgggtgtc
agctcgcccaatccgcctgtcggagcggtgatcctgaccgccgacggcaccgtcgccggt
gtcggcgcgacccaaccgccgggcggcccgcacgccgaggtcatggccttgcgcgcagcg
ggtgaagccgcgcggggcggtaccgcgatcgtcacgctcgaaccctgcaaccacaccgga
cgcaccgggccgtgctcgcaggcgctcatcgaggccggcgtcgtcgaggtccactacgcg
gtcagcgatcccaaccccgtcgccgcgggtggcgccgacactcttcgggccgccggcatc
cgggtgaccgggggagtcgcggtcgacgccgtggagaacggtccgctgcgtccgtggctc
acccgtcagcggctcgggcggccgatggtcaccgccaagatcgcggcgggcatcgacggc
cggatcgtcgcacccgacggcaccagccagtggatcaccgggccggcggcccgcgaccac
gcccaccagcagcgctcacgcctcgacgccatcgtcatcggcaccggcacggccctcgcc
gacaacccgaccctcaccgcccgcaccgccgatggcgggctgtacccgcaccagccggca
cgtgtggtgctcgggcaccgcgacctgcctgccgatgccaacgtccgcggcgacaccgga
ggaccgctggtctgcgtcgactcccaccacccggccgacgtcctctccgccctgcccgac
gcgctctgggtcctggtggagggcggcccgcacatcctcggcgccttcttcgccgccgac
ctcgtcgacgaggtccacgcctacgtcgcgccgatggtcctgggcgccggacgcagttcc
gtcgagatcccgggagtcaccactctggacgacgccagacggttcgaaacccgcgaggtc
acgacgctcggaagtgacatcttgatcgcactcgaccgctcatcgcgggcatcggcgcag
gactga

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