Gordonia alkanivorans: C5O27_14795
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Entry
C5O27_14795 CDS
T05876
Name
(GenBank) hydrolase Nlp/P60
KO
K21473
peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
Organism
gav
Gordonia alkanivorans
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gav01002
]
C5O27_14795
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gav01011
]
C5O27_14795
Peptidases and inhibitors [BR:
gav01002
]
Cysteine peptidases
Family C40
C5O27_14795
Peptidoglycan biosynthesis and degradation proteins [BR:
gav01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
C5O27_14795
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
DUF6889
Motif
Other DBs
NCBI-ProteinID:
AZZ82179
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Position
3250504..3251985
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AA seq
493 aa
AA seq
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MAAVLICAVGAGHAVATPKKAPESPVSGLINEIASVNQDIADLDEALAVRQENVNRAIVD
FQNSLAQRRLATVAARGARTELDRAGQAVTEAQKAFDNFVRLAYQQGPEQGSMSNYVASP
DPQAVLDRMKLLDQVGKKQQETIRRLQVARNQKANRLAAVEATRRQAAFAAKSADQRKRD
ALSAVTEAKTAIADQQERKSSLVAKRDRVQKKIDSIRGYVPKKQAAGPSTRDLLKNIFPA
APTLPDLPTTNVSDNELLAIAARAAARIAVDVGSAALGMGLDMGSQMLSTIIGEQRLPQS
ELLNELGLGGMDLTGSSGNDSLSSRLGSGSLGSLFGGSGGGGGSGGMVRPGLRGPQAVEI
VVNRALSQLGVTYAWGGGDVNGPTQGIRDGGVADSYGDYRKVGFDCSGLMIYAFAGVGIE
LPHYTGYQYTSGPHFPLSQMRRGDMIFYGPNASQHVALYLGDNKMVEAPQSGSVVKVSPL
RTNGAMPNVVRLL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgttctcatctgtgcggtcggcgccggtcatgccgtcgcgaccccgaagaag
gcgcccgagtcgccggtgagcgggctgatcaacgagatcgcctcggtgaaccaggacatc
gccgacctcgacgaggcactcgcggtccggcaggagaacgtcaaccgcgcgattgtcgac
tttcagaactcgctcgcccagcggcggctggcgaccgtcgccgcccgcggcgcgcgcacc
gagctcgaccgcgccggccaggccgtcaccgaggcgcagaaggccttcgacaacttcgtc
cgactcgcgtatcagcagggcccggagcagggttcgatgtcgaactacgtcgcgtccccg
gacccccaggcggtcctcgaccggatgaagcttctcgaccaggtcggcaagaagcagcag
gagaccatccgtcgtctccaggtcgcccgcaaccagaaggccaaccgcctcgccgcggtc
gaggcgacccggcggcaggcggcgttcgccgccaagagcgccgatcagcgcaagcgtgac
gcactgagcgcggtcaccgaggccaagaccgccatcgccgaccagcaggagcgcaagtcc
tcgctggtcgccaagcgtgatcgcgtgcagaagaagatcgactcgatccgcggatacgtg
cccaagaagcaggccgccggaccgtcgacccgtgacctgctgaagaacatcttcccggcg
gccccgaccctcccggacctgccgacgaccaacgtctccgacaacgaactgctcgcgatc
gcggcgcgtgccgccgcccggatcgccgtcgacgtgggttccgcggctctcggcatgggc
ctcgacatgggttcgcagatgctctcgacgatcatcggcgagcagcggcttccgcagtcc
gaactcctcaacgagctcggcctcggaggcatggacctcaccggcagcagcggcaacgac
agcctgagctcccggctgggttcgggaagcctcggctccctgttcggcggctccggcggc
ggtggcggctccggcggcatggtgcggccgggtctgcgcggcccacaggcggtcgagatc
gtcgtcaaccgtgcactgtcgcagctgggcgtcacctatgcctggggtggaggcgacgtc
aacggtccgacgcagggcatccgcgacggcggcgtcgccgacagctacggcgactaccgc
aaggtcggcttcgactgctcgggtctgatgatctacgccttcgccggtgtcggcatcgaa
ctgccgcactacacgggctaccagtacacctcgggaccgcacttcccgctctcgcagatg
cgtcgcggcgacatgatcttctacggcccgaacgcgagccagcacgtagcgctctacctc
ggtgacaacaagatggtcgaggccccgcagtccggctccgtcgtcaaggtgtcgcccctg
cgcaccaacggtgcgatgcccaacgtggtccggctgctctga
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