KEGG   Gordonia alkanivorans: C5O27_15370
Entry
C5O27_15370       CDS       T05876                                 
Name
(GenBank) hypothetical protein
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
gav  Gordonia alkanivorans
Brite
KEGG Orthology (KO) [BR:gav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gav03400]
    C5O27_15370
Enzymes [BR:gav01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C5O27_15370
DNA repair and recombination proteins [BR:gav03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    C5O27_15370
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C AAA_30 UvrD_C_2 DEAD
Other DBs
NCBI-ProteinID: AZZ82280
LinkDB
Position
complement(3378916..3381834)
AA seq 972 aa
MQASAAELLVELRALWNDWQERPLWYLHTFLPNVEANGARAGRSPVEQDLLRRLRAVLDE
SDWRNLAELVDRVDQRRVEDLVKHQDEQRARAEELARAQREAEAAERAEFMAAQRAAEQE
EAAAHAKVLAEVAKREQQKSSLISSLKAEFSRDFFGAHGWWRLNDKNSLVSSAEYQNLVS
DFVTDWCRHHLGTASGDARKYIPNPEQAAVIGAISSHSLVEARAGSGKTATIVARAVFLI
KATSVDPSEILMLAFNAAAAAEMRDRLEKLLPGGRIPHVMTFHALAYRLVHPSENLVFDQ
SDSIRPLSRLVQDVIDEFISVPESQEEVRQIMLAYFRMDWESIAQRGDNLSHSDQVEYRR
QHLQSETINGEFVRSYGEKLIANIMAENDLTYFYERDHRWDGFNYKPDFTVCDHDGKTSI
VIEYFGLTGEADYDRLSAEKRKYWKGRPEFTFLEYNAYDVKDPSFRTRLLSNLEEAGARP
NQLTDDQIWRRIKKRAIGRFTDTVTTMIGRARQRRWDSKDLHANWQEVAVSDPHLNMFID
LGARILDRYEIRLINDRKEDFTGLIWRAVDCIRAGVTQFGSAGVIDGDLRGLRFLVVDEF
QDFSMMFYRLLREIVSVTGGAQVTAVGDEWQAINEFAGSTTEYFRSFEDLFTGGQRMKLS
INRRSTNDLVRLGNTVMAGQGFEARGFSDNSGEIREFSMDLFSPSALEEDTFGQFDHLTP
SLIRLITSHLRYGRSVAVLARVARRRYRVRIDNTDHTFYTIGDLGGFIRERLNVTEPSSL
IFSSTHGFKGQESDAVILLDVDGRNYPLIHPTWVLFQVFGDDIETLTAAERRLFYVAVSR
PRRYLDVITTRRDRSPFWPDADHQRVQLAGVVTRAPWSCLPDAAAPLKPDYVEIRAYISG
AENFEDLRRHLQKTDFRFHQSYTRYWVRFLHKSDFSSDLLHRSRLGKYPGVRLEAWHQGQ
LLATHSQPSHNW
NT seq 2919 nt   +upstreamnt  +downstreamnt
atgcaagccagcgcagccgagctactcgtcgagttgagagcgctgtggaacgactggcaa
gaacggcctctctggtacttgcacaccttcctaccgaacgtcgaggccaatggggcacgg
gccggccggtctcccgtagaacaggatcttttgcgccgccttcgggcagtgctggacgag
tctgactggcgaaatctagccgagctggttgaccgcgtggaccagcgccgcgttgaggat
ctggtgaaacaccaagacgagcagcgagcacgtgctgaggagctcgctcgtgcacagcgc
gaagcggaggcggccgagcgcgccgaattcatggcggcccagcgagccgcagagcaagaa
gaagccgctgcgcatgccaaggttctagccgaagtcgccaagcgggaacagcagaagagc
tcgctgatcagctcgctaaaagctgagttctcccgcgacttcttcggcgctcacggttgg
tggcgactaaacgacaagaacagccttgtaagcagcgcagaataccaaaatctcgtctcc
gatttcgtaacggattggtgtcgccaccacctgggcacagcttcaggcgacgcccgaaag
tacattccgaacccagaacaggcggcggtgatcggcgccatatcgagccactcactggtc
gaagctcgtgcagggagcgggaagactgccacaatcgttgctcgcgccgtattcctaatc
aaggcgacgtccgtagatccgtccgaaatcttgatgctcgcgttcaacgccgctgcggct
gcagagatgcgggacagactcgaaaaactcctacctggtggacgaataccgcacgtcatg
accttccatgcgttggcatatcgcctcgtccacccaagcgaaaatctggtttttgaccag
tccgatagcattcggccactgagccgcttggtccaggatgtaatcgacgaattcatctca
gtccccgaatctcaggaagaggttcggcagataatgcttgcatactttcggatggactgg
gaatcgatcgcacaacgcggagataacctcagccatagcgatcaagtggagtatcgtcgg
caacaccttcagagcgaaactataaatggcgagttcgtccggtcatacggcgagaagttg
atcgccaatattatggccgagaatgacttgacgtacttctatgaacgcgatcaccgttgg
gatgggttcaattacaagccggattttacagtgtgcgatcatgacggcaagacatcaatt
gttatagaatattttggactgacaggcgaagcggactacgacagactctcggctgagaag
agaaaatactggaaaggtcgacccgagtttacgttccttgagtacaacgcgtatgacgtt
aaagacccttcatttaggactcgacttctttcgaatctagaggaggccggagcgcgacca
aatcagctcacggatgatcagatctggcgtcgtatcaagaagagggcaatcggccgattc
accgacacagtaacgaccatgataggacgggcgcgacagcgccggtgggattcgaaagat
ctccacgccaattggcaagaggtcgcagtttccgatccccacttgaacatgttcattgat
ctgggtgcacgcatcttggacaggtacgagatccgtttgatcaatgacagaaaggaagat
ttcaccggtctgatttggcgtgctgtggattgcatacgcgccggtgtgacgcagtttgga
agcgcgggcgtgatcgatggcgatctacgagggctccggtttctggttgttgacgagttt
caagacttctctatgatgttttaccgattacttcgcgaaatagtctctgtaacaggcggc
gcccaggttacggcagtaggtgatgagtggcaggccatcaatgagtttgccggatcgaca
accgaatactttcgaagtttcgaggatctgttcaccgggggtcagcgtatgaagctgtcc
ataaaccggagatcaacaaatgacctcgtacgtctaggaaacactgtcatggccggccaa
gggttcgaggcgcgaggattttccgacaactccggtgagatcagggaattttcgatggat
ttgttctccccttccgcccttgaggaagatactttcggccaatttgatcatcttacgccg
agcctaattcgcctgatcacaagtcatctgcggtatggtcggagcgttgcggtgctggcc
cgagttgctcgacgacgatacagagttcgcatcgataatactgatcacaccttctataca
ataggcgatctcgggggctttatacgcgagcgtctaaacgtcaccgagccaagcagcctg
atattcagctcaacgcacgggttcaaaggtcaagagtcggacgccgttatcctcttggac
gtcgacggccgtaattatccgttgattcatccgacatgggtcttgttccaagtcttcggc
gatgatatcgagacgctaactgctgcggaaaggcgattattttacgtcgctgtgagccgt
cccagacggtatctcgatgtgattactacccgccgagatcgatctccattctggcccgat
gctgatcaccagagggttcaactcgcaggagtcgtgacgcgtgcgccctggagttgtcta
cccgacgcagccgcaccactcaaacccgactacgtggaaatacgcgcctacatctcgggt
gcggagaacttcgaagacttacgtaggcatctccagaagacagactttagattccatcaa
agctacaccagatattgggtgcgtttcctccacaagtccgatttcagtagcgatctactt
catagatcgcgccttgggaagtatccgggggtgcgattggaagcctggcatcagggacag
ctcctggctactcattctcagccatcccacaactggtaa

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