Gordonia alkanivorans: C5O27_18390
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Entry
C5O27_18390 CDS
T05876
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gav
Gordonia alkanivorans
Pathway
gav00260
Glycine, serine and threonine metabolism
gav00460
Cyanoamino acid metabolism
gav00630
Glyoxylate and dicarboxylate metabolism
gav00670
One carbon pool by folate
gav00680
Methane metabolism
gav01100
Metabolic pathways
gav01110
Biosynthesis of secondary metabolites
gav01120
Microbial metabolism in diverse environments
gav01200
Carbon metabolism
gav01230
Biosynthesis of amino acids
gav01240
Biosynthesis of cofactors
gav04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
C5O27_18390
09102 Energy metabolism
00680 Methane metabolism
C5O27_18390
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C5O27_18390
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
C5O27_18390
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
C5O27_18390
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
C5O27_18390
Enzymes [BR:
gav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
C5O27_18390
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
SelA
Motif
Other DBs
NCBI-ProteinID:
AZZ83836
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Position
complement(4046313..4047536)
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AA seq
407 aa
AA seq
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MPPGIGSTGDPQIDALIERESTRRRTWLQLLASETEPTSGVRAAMASTFDSKYAEGRPGS
RYHGGCEVVDELEELAIGRARDLFGAGHVDVQPLSGSAANLAVHAAFAQPGDPVLALRLE
HGGHQTHGSRANFSGRWFSPLHYEVRRDDELVDYDQVRELALVHRPRMLVAGATSYSRSF
DYPLLREIADEAECILLVDAAHLAGHVAAGLLPSPVPHADVVTFSTNKVFRGPRGGIILA
RTEHADALRKAVHPFIQGGPSMHAIAAKAVTFHDAGTEEFADYVRATARIATDLADALTA
RGLRVVSGGTDIHLAVVDVAALGISGSEAQDRLNRSGIVVDKAVLPFDDRPVAEGSGIRI
GTPAATSRGLTADMIPAVADAMLAAMSTDDLATHDRIHREISSLACG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgggcatcggttcgacgggtgacccgcagatcgacgcgctgatcgagcgggag
tcgacccgccggcggacgtggctccagctgctcgcgagcgagaccgaaccgacttccggg
gtgcgggccgcgatggcctcgaccttcgactcgaagtacgccgaggggcgccccgggtcc
cgctatcacggtgggtgcgaggtcgtcgacgagctcgaggagctcgcgatcggccgggcg
cgggacctcttcggcgccggtcacgtcgacgtccagccgctgtcggggagtgcggcgaat
ctcgccgtccatgccgcgttcgcccaaccgggcgaccccgtgctcgcgctgcggctcgaa
cacggcgggcaccagacccacggttcgcgcgccaacttctccgggcgctggttctcgccg
ctgcactacgaggtgcgccgcgacgatgagctcgtcgactacgaccaggtacgggaactc
gccctggtgcaccggccgcggatgctggtcgcgggcgccacgtcgtattcgcgctccttc
gactacccgctgctccgcgagatagcagacgaggccgagtgcatcctcctggtcgacgcc
gcgcatctcgccggacacgtcgccgccgggctcctcccgtcgccggtgccgcacgccgac
gtcgtcactttctccaccaacaaggtcttccgcgggccccgcggcggcatcatcctggcg
cgcaccgaacatgcagacgcgttgcgcaaggcggtccacccgttcatccagggcggtccg
tccatgcacgcgatcgccgcgaaggccgtcaccttccacgacgccggtaccgaggagttc
gccgactacgtgcgggcgaccgcgcgcatcgcgaccgacctcgccgacgcgttgaccgcc
cgcgggctgcgcgtggtctccgggggcacggacatccatctcgcggtggtcgacgtcgcc
gcgctcggcatctccgggtccgaggcgcaggatcgtctcaaccgatcggggatcgtggtc
gacaaagccgtcctgcccttcgacgaccgtcccgtcgccgagggctcgggcatccggatc
ggcaccccggcggccacctcccggggcctgaccgcggacatgatcccggcggtcgccgat
gcgatgctggccgcgatgtcgaccgacgatctcgcgacgcacgatcggatccaccgtgag
atcagcagcctcgcatgcgggtag
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