Gordonia alkanivorans: C5O27_18495
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Entry
C5O27_18495 CDS
T05876
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
gav
Gordonia alkanivorans
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gav03400
]
C5O27_18495
DNA repair and recombination proteins [BR:
gav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C5O27_18495
Archaeal homologous recombinant proteins
C5O27_18495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AZZ82799
LinkDB
All DBs
Position
complement(4070593..4071780)
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AA seq
395 aa
AA seq
DB search
MRIVHTSDWHLGRTFHGVDLLADQRRALSHLAELVAAESADAVIVAGDVYDRSVPSADAV
RAYDEGLAEIAAAGARIIVTSGNHDSPTRLGAGSAFAAAGGLHLRTSIDAIAEPIVLSDE
HGEVAVYGIPYLEPDTARRHLGVEEVCGHTAVLDAAMTRIRADLASRQARSIVVAHAFVS
GAAASGSERSISVGGVETVPAETFSGADYVALGHLHSPQRVTDTVRYSGSLLPYSFGERT
HRKAVWVVDLDADGVGDIRKHELPVVRELSSLRGTLDELLTSEQFAGAEDHYVEVTLTDA
VRPLDAMRRLRERFPCAVHVQWDRPHTGSGVDYRSRVRGRSDAEIINSFIEDVRDTPTKG
ERVLIERALRAVVGEPEADGELALFALDTFVAETA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcgtgcacacctccgactggcacctgggccggacgttccatggtgtcgacctg
ctcgccgaccagcgtcgtgcgctgagccacctcgccgagctggtcgccgccgaatcggcc
gacgccgtgatcgtcgccggcgacgtctacgaccgttcggtgccctcggccgacgcggtg
cgtgcctacgacgaaggcctggccgagatcgccgccgccggtgcccggatcatcgtcacc
tcgggcaaccacgactcgcccacgcgcctcggcgcggggtcggcgttcgcggcggccggc
ggactgcacctgcggacctcgatcgatgcgatcgccgagccgatcgtcctgtccgacgag
cacggcgaggtcgcggtgtacggcatcccgtacctcgaacccgacaccgcccgtcgccat
ctcggggtcgaggaggtgtgcggccacaccgcagttctcgatgccgcgatgacccgcatc
cgcgccgacctcgcgtcccggcaggcccgatcgatcgtcgtcgcccacgccttcgtcagc
ggcgccgccgcctccgggtccgagcggtcgatcagcgtcgggggagtcgaaaccgttccc
gccgagaccttctccggtgccgattacgtcgccctcggtcatctgcactcgccgcagcgc
gtcaccgacaccgtccggtacagcggttcgctgctcccgtactccttcggcgagcgcacg
catcgcaaagcggtgtgggtggtcgacctcgatgccgacggggtcggcgatatccgcaag
cacgagcttccggtcgtgcgcgagttgagctccctccgtggaacactcgacgagttgctg
acctcggagcagttcgcgggcgccgaggaccactacgtcgaggtgaccttgaccgacgcg
gtacgcccgctcgacgcgatgcgacgcctgcgggagcggttcccgtgcgcggtgcacgtg
cagtgggaccgcccgcacaccggctcgggggtcgactaccgttcgcgggtccgcggccgg
agcgatgccgagatcatcaactccttcatcgaggacgtccgcgacaccccgaccaagggg
gagcgggtgctgatcgaacgcgcactgcgggcggtcgtcggcgaacccgaggccgacggc
gagctcgcgctgttcgccctcgatacgttcgtcgccgagaccgcgtga
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