Gordonia alkanivorans: C5O27_19325
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Entry
C5O27_19325 CDS
T05876
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gav
Gordonia alkanivorans
Pathway
gav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C5O27_19325 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gav03019
]
C5O27_19325 (groL)
03110 Chaperones and folding catalysts [BR:
gav03110
]
C5O27_19325 (groL)
03029 Mitochondrial biogenesis [BR:
gav03029
]
C5O27_19325 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gav04147
]
C5O27_19325 (groL)
Enzymes [BR:
gav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
C5O27_19325 (groL)
Messenger RNA biogenesis [BR:
gav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
C5O27_19325 (groL)
Chaperones and folding catalysts [BR:
gav03110
]
Heat shock proteins
HSP60 / Chaperonin
C5O27_19325 (groL)
Mitochondrial biogenesis [BR:
gav03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
C5O27_19325 (groL)
Exosome [BR:
gav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
C5O27_19325 (groL)
Exosomal proteins of other body fluids (saliva and urine)
C5O27_19325 (groL)
Exosomal proteins of breast cancer cells
C5O27_19325 (groL)
Exosomal proteins of colorectal cancer cells
C5O27_19325 (groL)
Exosomal proteins of bladder cancer cells
C5O27_19325 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AZZ82944
LinkDB
All DBs
Position
complement(4253766..4255382)
Genome browser
AA seq
538 aa
AA seq
DB search
MAKQIEFNETARRALERGIDQLADTVKVTLGPRGRHVVLAKAFGGPSVTNDGVTIARDID
LEDPFENLGAQLVKSVATKTNDVAGDGTTTATVLAQAMVKAGLRNVAAGANPIALGVGIS
KAADALSEALLAAATPVDGEQSIAQIATVSSRDEEIGEMVGKAMSVVGADGVVTVEEGSG
LQTELEITEGVQFDKGFLSPYFVTDVDSQEAVLEDALVLLYRDKISSLPEFLPLLEKVVE
AGKSLLIVAEDVEGEPLSTLVVNSIRKTIRAVAVKSPFFGDRRKAFMEDLAVVTGGTVVT
SDVGLTLSTVGLEVLGSARRVVVTKDATTIVEGAGTKEAIAGRAAQLRREIEASDSDWDK
EKLAERLAKLAGGVAVIRVGAATETSLKERKHRVEDAVAAAKAAVEEGIIPGGGSAIVQA
SKVLDELAASLTDDEALGVRVVRDAAKAPLFWIASNAGLDGAVVVSKVADLGKNEGFNAA
SLTYGDLVGEGIIDPVKVTRSAVVNAASVARMVLTTETAITDQPAQEPAGHAGHGHAH
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagattgaattcaacgaaaccgcgcggcgggcgctcgagcgaggcatcgat
cagctcgccgacaccgtcaaggtcaccctgggcccgcgcggccggcacgtggtgctggcc
aaggcattcggcggaccgagcgtcaccaacgacggcgtcaccatcgctcgtgacatcgac
ctcgaggaccccttcgagaacctcggtgcccagctggtgaagtcggttgccaccaagacc
aacgacgtcgcaggcgacggcaccaccaccgcaaccgttctcgcgcaggcgatggtcaag
gccggactgcgcaacgtcgccgccggtgccaacccgatcgcactcggcgtgggcatcagc
aaggccgccgacgcactgagcgaggccctgctggccgccgcgaccccggtcgacggcgag
cagtccatcgcccagatcgccaccgtctcctcgcgtgacgaggagatcggcgagatggtc
ggcaaggcgatgagcgtggtcggcgctgacggcgtcgtcaccgtcgaagagggctcgggt
ctgcagaccgaactcgagatcaccgagggcgtgcagttcgacaagggcttcctctcgccg
tacttcgtcaccgacgtcgacagccaggaagcggtcctcgaggacgcgctcgtgctgctg
taccgcgacaagatcagctcgctgccggagttcctgccgctgctggagaaggtcgtcgag
gcgggcaagtccctgctgatcgtcgccgaggacgtcgagggcgagccgctgtcgaccctc
gtggtgaactcgatccgcaagaccatccgcgccgtcgcggtgaagtcgccgttcttcggt
gaccgtcgcaaggcgttcatggaggacctggcggtcgtcaccggcggcaccgtggtcacc
tccgacgtgggcctgaccctgtcgaccgtgggcctggaggttctcggttcggcgcgtcgt
gtcgtcgtcaccaaggacgccaccaccatcgtcgagggtgcgggcaccaaggaggccatc
gccggtcgcgccgcgcagctgcgtcgcgagatcgaggcgtcggactccgactgggacaag
gagaagctcgccgagcgtctggccaagctggccggcggcgtcgccgtcatccgcgtcggt
gcggccaccgagacctccctcaaggagcgcaagcaccgcgtcgaggacgctgtcgccgca
gccaaggccgcggtcgaggaaggcatcatccccggcggcggttcggccatcgtccaggca
tcgaaggtgctcgacgagctcgccgcctcgctgaccgacgacgaggcgctgggcgtccgc
gtggtccgggacgccgccaaggccccgctgttctggatcgcctccaacgccggtctcgac
ggtgccgtcgtggtgtccaaggtcgccgacctcggcaagaacgagggcttcaacgccgcg
agcctcacctacggtgacctcgtcggcgagggcatcatcgacccggtgaaggtgacccgt
tccgcggttgtcaacgccgcgtcggtcgcccgcatggtgctcaccaccgagaccgcgatc
accgatcagcccgcgcaggagccggccggtcacgccggacacggtcacgcgcactga
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