Gordonia alkanivorans: C5O27_19520
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Entry
C5O27_19520 CDS
T05876
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
gav
Gordonia alkanivorans
Pathway
gav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C5O27_19520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gav03400
]
C5O27_19520
Enzymes [BR:
gav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
C5O27_19520
DNA repair and recombination proteins [BR:
gav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
C5O27_19520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
AZZ82982
LinkDB
All DBs
Position
4297073..4297330
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AA seq
85 aa
AA seq
DB search
MSTDSDDTGEEYTPVAELGYEEARDELADIVGTLEHGGLDLDTSLALWERGEALATRCEE
HLRGARERIETVIAQKNSADPDDNE
NT seq
258 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgacagtgacgacaccggcgaggagtacacgccggttgccgaactcggctac
gaggaggcgcgcgacgagctcgccgacatcgtcggcacgctcgagcacggcggcctcgat
ctcgacacctcgctggccctgtgggagcggggcgaggcgctcgcgacgcgctgcgaggaa
cacctccgcggggcgcgtgaacgcatcgaaaccgtgatcgcacagaagaattcggccgat
ccggacgacaacgagtag
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