Gordonia alkanivorans: C5O27_19600
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Entry
C5O27_19600 CDS
T05876
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gav
Gordonia alkanivorans
Pathway
gav00260
Glycine, serine and threonine metabolism
gav00460
Cyanoamino acid metabolism
gav00630
Glyoxylate and dicarboxylate metabolism
gav00670
One carbon pool by folate
gav00680
Methane metabolism
gav01100
Metabolic pathways
gav01110
Biosynthesis of secondary metabolites
gav01120
Microbial metabolism in diverse environments
gav01200
Carbon metabolism
gav01230
Biosynthesis of amino acids
gav01240
Biosynthesis of cofactors
gav04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
C5O27_19600
09102 Energy metabolism
00680 Methane metabolism
C5O27_19600
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C5O27_19600
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
C5O27_19600
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
C5O27_19600
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
C5O27_19600
Enzymes [BR:
gav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
C5O27_19600
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
SelA
eCIS_core
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AZZ83861
LinkDB
All DBs
Position
complement(4313203..4314480)
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AA seq
425 aa
AA seq
DB search
MSLAELDPDVAAAMNGELSRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGYPGRRYY
GGCEYVDVVEDIARNRAKELFGADFANVQPHSGAQANAAVLQALMEPGETMLGLDLAHGG
HLTHGMRLNFSGKLYENAFYGVSKEDFRIDMDEVRKIALDVKPKVIVAGWSAYPRTLDFE
AFRSIADEVGAHLWVDMAHFAGLVAAGLHPSPVPHADVVSSTVHKTLGGPRSGIILAKQE
WAKKLNSAVFPGQQGGPLMHAIAGKAVALKIAGTEEFAERQRRTMSGASILAERLNGEDV
AKAGVSVLTGGTDVHLVLVDLRNSDLDGQQAEDLLHQVGITVNRNAVPFDPRPPMVTSGL
RIGTPALATRGFGDEEFTEVADIIATALAAGSSADVSALRGRVSKLALDFPLYEGLEEWG
LMSRI
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtccctggcggagctcgaccccgacgtcgccgccgccatgaacggcgaactcagccgt
cagcgggacactctcgagatgatcgcctcggagaacttcgtgccgcgcgcggtgctgcag
gcgcaaggcagcgtgctcaccaacaagtacgccgagggttacccgggacgtcgttactac
ggcggctgcgagtacgtcgacgtggtcgaggacattgcccgcaatcgcgccaaggaactg
ttcggcgccgacttcgccaacgtccagccgcattcgggcgcgcaggccaacgcggccgtg
ttgcaggcgctgatggagccgggggagaccatgctcggtctcgatctcgcccacggcggt
cacctcacgcacggcatgcgcctgaacttctccggcaagctctacgagaacgccttctac
ggcgtgagcaaggaagacttccggatcgacatggacgaggtgcgcaagatcgccctcgac
gtgaagccgaaggtcatcgtcgccggctggtcggcctacccgcggaccctcgacttcgag
gcgttccgctcgatcgccgacgaggtgggcgcacacctgtgggtcgacatggcgcacttc
gccgggctcgtcgccgcgggcctgcacccgtcgccggtgccgcatgccgacgtcgtcagc
tcgaccgtgcacaagaccctcggcggaccccgctccggcatcatcctcgccaagcaggag
tgggccaagaagctcaactcggccgtgttccccggccagcagggcggaccgctcatgcac
gcgatcgccggcaaggccgtcgcgctcaagatcgccggtaccgaggagttcgccgagcgg
cagcgccgcaccatgtcgggcgcgagcatcctcgccgaacgcctcaacggtgaggacgtc
gccaaagccggcgtctcggtcctgaccggcggcaccgacgtccacctcgtgctcgtcgac
ctgcgcaacagcgacctcgacggccagcaggccgaggatctgctccaccaggtcgggatc
acggtcaaccggaacgcggtgccgttcgacccgcgtccgccgatggtcacctcgggtctg
cgcatcggcacccccgcgctggccacccgtggcttcggcgacgaggagttcaccgaggtc
gccgacatcatcgcgacggcgctcgccgcaggttcgtcggcggacgtctcggccctgcgt
ggccgggtctccaagctcgccctcgacttcccgctgtacgagggactcgaggagtgggga
ctgatgagccgcatctga
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