Gordonia alkanivorans: C5O27_20950
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Entry
C5O27_20950 CDS
T05876
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gav
Gordonia alkanivorans
Pathway
gav03420
Nucleotide excision repair
gav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C5O27_20950
03430 Mismatch repair
C5O27_20950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gav03400
]
C5O27_20950
Enzymes [BR:
gav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C5O27_20950
DNA repair and recombination proteins [BR:
gav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C5O27_20950
MMR (mismatch excision repair)
Other MMR factors
C5O27_20950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AZZ83220
LinkDB
All DBs
Position
complement(4603303..4605852)
Genome browser
AA seq
849 aa
AA seq
DB search
MNSSSSAPLLAGRTSSSSPGTAAADDRVARLLEGLNPQQRAAVLHAGSPLLIVAGAGSGK
TSVLTRRIAYLLAARDVTPGQILAITFTNKAAAEMRERVIDLVGPRAAYMWVSTFHSTCV
RILRAQSGLLESMNSNFSIYDADDSKRLLGMIIRDLDLDPKKFSPRGVSVAISNYKNELI
SPDAASASANEDDFTAATIAKIFAEYQRRLRAANAFDFDDLIGETVALLHRHPQVAEYYR
RRFRHVLVDEYQDTNHAQYVLIRELVGEQTTASGLEPSELCVVGDADQSIYAFRGATIRN
IEEFERDFTNAETVLLEQNYRSTQTILSAANAVIARNTGRREKRLWTDSGDGELIVGYVA
DSDREESTFIAKEIEELTDYSIGGSSSYKYSDVAVFYRTNTGSRAIEEVFVRHGIPYKVV
GGTKFYERKEVRDVVAYLRVVANPDDSVSLRRILNTPRRGIGDRAEACVAVHSENTGRSF
YESLIDASEGKVALLNTRAVKQIGGFVELIEGLRADFLTHFGESDTADADTAFLDATEES
ADIGELVDAIVERTGYRAELEASNDPQDGARLDNINELVAVAREFSADAAQVDLEADDDP
SGAGSGVSGPNPDGVEVDREGEPEPGSLAAFLERVSLVADADQVPDEGDGVVTMMTLHTA
KGLEFPVVFVTGWEDGHFPHMRALGDPNELSEERRLAYVGITRAKQRLYLTRSVTRASWG
QPVSNPESRFLQEIPQHLIDWRRTEPRRSARGFGGSSGGVFGRDGSFSGSGGGSSFGRGR
SSYSSDPARGRNKQVHLDIGDRHNHPKYGMGKVVAKEGSGATERVTIDYGGSAGRVTLLT
AGGIPGEKL
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaacagctcttcttctgcccctctcctcgccggtcgcacgtcttcctcctccccgggg
acggctgccgccgacgaccgtgtcgcacgcctgctcgagggcctcaacccgcagcagcgc
gccgcggtgctccacgcgggctcgcccctgctgatcgtggccggcgcgggttcgggcaag
acctcggtgctgactcgccgcatcgcctacctgctggcggcgcgcgacgtcacgcccggg
cagatcctggccatcaccttcaccaacaaagccgctgccgagatgcgcgagcgtgtcatc
gacctggtggggccgcgggccgcctacatgtgggtctcgaccttccactcgacgtgcgtc
cgcatcctgcgggcacagtcggggctgctggagtcgatgaactccaacttctccatctac
gacgccgacgactcgaaacggttgctgggcatgatcatccgcgacctcgacctggacccg
aagaagttcagtccgcgcggtgtctcggtggccatctcgaactacaagaacgagctgatc
tcgcccgacgcggcgtcggcgtcggcaaacgaggacgatttcaccgcggcgaccatcgcg
aagatcttcgccgagtaccagcgccggttgcgtgcggccaacgccttcgacttcgacgac
ctgatcggtgagaccgtcgccctgctgcaccggcacccgcaggtcgccgagtactaccgg
cgccggttccgtcacgtcctcgtcgacgagtaccaggacaccaaccacgcccagtacgtc
ctcatccgcgaactggtgggtgagcagaccaccgcgagcggcctcgaaccctccgaactg
tgcgtcgtgggtgacgccgatcagtcgatctacgctttccgcggcgccaccatccgcaac
atcgaagagttcgagcgcgacttcacgaatgccgaaaccgttctgctcgaacagaactac
cgctcgacgcagaccatcctgtcggctgccaacgcggtcatcgcgcgtaacaccggccgt
cgcgagaagaggctgtggaccgactccggcgacggcgaactcatcgtcggctacgtcgcc
gactccgatcgtgaggagtcgacgttcatcgccaaggagatcgaggaactcaccgactac
tcgatcggcgggtcgtcgagttacaagtactccgacgtcgcggtcttctaccgcaccaac
accggttcccgagcgatcgaggaggtgttcgtccgccacggcatcccgtacaaggtggtc
ggcggcaccaagttctatgagcgcaaagaggtccgggacgtggtggcctacctgcgggtg
gtcgccaaccccgatgactcggtgagcctgcgccgaatcctcaacaccccccgacgcggc
atcggggatcgcgccgaagcctgtgtcgcggtccattcggagaacacgggccgtagcttc
tacgagtcgctcatcgacgcttccgagggcaaggtcgcgctgctgaacacgcgcgcggtc
aagcagatcggcggcttcgtcgaactcatcgagggtctgcgcgccgatttcctcacgcac
ttcggcgaatccgacaccgccgacgccgacaccgccttcctcgacgccaccgaggagtcc
gccgacatcggtgaactcgtcgacgcgatcgtcgaacgcaccggttaccgtgccgaactg
gaggcgtcgaacgatccccaggacggcgctcggctcgacaacatcaacgaactcgtagcc
gtcgcacgagaattcagcgccgacgcggcccaggtcgatctggaggcggacgatgatccg
tccggcgccgggagcggagtgagcgggccgaatcccgacggagtcgaggtggaccgcgag
ggtgaacccgaacccggttctctcgcagcatttctcgaacgggtctcgctggtcgccgat
gccgaccaggtgcccgacgagggtgacggcgtcgtcacgatgatgacgctgcacaccgcg
aagggcctggagttcccggtggtgttcgtgaccggttgggaggacgggcatttcccgcac
atgcgagcactcggtgacccgaacgaactgagtgaggaacgccgcctggcctacgtgggc
atcacccgagccaagcagcgtctgtacctgacccgatcggtgacccgtgcctcatggggg
cagccggtgtcgaatccggaatcccgcttcctgcaggagatcccgcagcacctcatcgac
tggcgacgcaccgagccacgtcgttcggcacgtggcttcggcggatcgtcgggcggtgtt
ttcggccgcgacggctcgttctccggcagtggcggtggctcgtcgttcggtcgcgggcgg
tcgtcgtactcctccgacccggcccgtggacgcaacaagcaggtgcatctcgacatcggt
gaccggcacaaccatcccaagtacggcatgggcaaggtcgtggccaaggaggggagcggc
gccaccgaacgcgtcaccatcgactacggcggcagcgccggccgcgtcaccctgctgacc
gcaggtggcatcccgggagagaagctctag
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