Gimesia aquarii: V144x_04970
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Entry
V144x_04970 CDS
T09973
Symbol
rpoA_1
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gaw
Gimesia aquarii
Pathway
gaw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gaw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
V144x_04970 (rpoA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaw03021
]
V144x_04970 (rpoA_1)
03400 DNA repair and recombination proteins [BR:
gaw03400
]
V144x_04970 (rpoA_1)
Enzymes [BR:
gaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
V144x_04970 (rpoA_1)
Transcription machinery [BR:
gaw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
V144x_04970 (rpoA_1)
DNA repair and recombination proteins [BR:
gaw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
V144x_04970 (rpoA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
NitrOD1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QDT95063
UniProt:
A0A517VPZ9
LinkDB
All DBs
Position
complement(586637..587653)
Genome browser
AA seq
338 aa
AA seq
DB search
MRIRWRGLELPSRVIPDRDSMTSTYGMFVAEPFERGFGATIANSLRRILLSSLEGSSVTR
VKIQGVQHEFTTIPGVVEDITEICLNLKSLIVKNSSSTSKTLRIEKHERGVVTGADVITD
DQVEVINQDLVIATMTDDVPLNMEITVENGRGYTPASEHAEHDMEVGVIPLDATFSPVVR
VRYKIEDTRVGQRTNYDKLILEIWTNGTVKPDMALVEASKILRKHLNPFITYREPGPEMP
PEGGLKGMLDTTGYAPIDLELEEKLNQSLAELNLSVRATNCLESEGINTVRDLVGKSEDH
LLHVRNFGETTLVEVRERLSQIGLRLGMKIPNSSSQPR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatccgttggcgaggactggaattaccaagccgtgtcatccctgatcgggactca
atgacatctacttatggtatgtttgtagccgaaccatttgagcgtggattcggagcaact
attgccaacagtttacggcgaatcctgctttccagtttggaaggtagctccgtcacgcgt
gttaaaattcaaggtgttcaacacgaattcacaaccattcctggagtggttgaagacatc
accgaaatttgcttgaatttaaaatcgttaatcgtcaagaattccagttccacttcaaaa
acattgcgaatcgaaaaacacgagcgtggtgttgtaacgggagctgatgtcattaccgat
gatcaggtcgaagtgatcaatcaagatcttgtcatagcaacaatgacagacgatgttccg
ctcaacatggaaattaccgttgaaaatggtcgtggttatactcccgcctctgaacatgca
gaacacgatatggaagtaggcgtcattcctttggatgccactttctcaccagttgttcgt
gttcgctataagattgaagatacacgcgttggacaacgtactaactatgacaaactgatt
ctggaaatctggactaacggaactgtcaaaccagatatggctctggtcgaagcttccaag
atcctgcgtaagcacctcaatccctttattacttaccgagagcccggcccagaaatgcca
ccagaaggtggtctcaagggtatgttggatacaaccggctatgccccaattgaccttgag
ctggaagagaaactcaaccagagtcttgctgaattaaacctctcagtacgtgcgacgaac
tgtctggaatccgaaggaattaacaccgttcgtgatctggtaggtaagtcagaagaccat
ctgttacacgttcgcaattttggggaaaccactctcgtcgaagtccgtgagcggctaagt
cagattggcctacgtcttggtatgaagattcctaattcctcatcacaaccgcgttaa
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