Gimesia aquarii: V144x_10680
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Entry
V144x_10680 CDS
T09973
Name
(GenBank) outer membrane porin HofQ
Organism
gaw
Gimesia aquarii
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
STN
PRTRC_E
DSE-like_N
GAPES1
Secretin_N
TPR_2
TPR_11
TPR_4
Motif
Other DBs
NCBI-ProteinID:
QDT95623
UniProt:
A0A517VRI6
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All DBs
Position
1247515..1252626
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AA seq
1703 aa
AA seq
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MVLNWDFGLKFLPTLDSELEVMMTPQKKHNQSWCSGLKEGPTLGKAFGVLACTTLVAASM
WLANLGNTTRKVAADVEKNGQPVSGRQQRSARYYLSLGTQYYERGQFAEAVEVLEKASVS
PGRLSSAEFRKMNDYLGRARQRAAAPHKKQIVRAQSPTSDTRFSTNISNRDGKSPEEMKQ
LARQLLQSAREDIKLNEFAKARQKAGQVVSMRLEYGPFDERPEQVLADIARAEQRNQKDS
PIQQAGGFSGQTSRIVQVANNESTNSNPFGNPFDGSQTQNLTEKQQATVLLKQARQALNA
GHYDDARTLAIQAQDYDVAYKLFDERPQHILAEIERKTGAKIFAGQSKRSMPVAQTSPNG
SDKEQAAQLLKQSRAELQAGRYGSARELALQASQLEVAYRLFDDRPELVLDEIKRAQAGS
GSLAAANTGRSTVTVPQGSPKAQATELLRLARLDIKKRNFDSARQKVSQVQQMQVSYDLF
DDRPELVLAAIDRISDEAATSSGIKGLQQNQDAVRPRINRLMERAQVALQQGNKDEALML
ASSAQKLAQTLKVKFSPDRESPAEFIQRVGISSETRLNPGTTQSAKGNSNPEYARQLIAA
AREDLAKNRVEEARQKAEAAQKIDTAYTLFEDRPEQVLADIRKMAGQPGGLSRDQLYAAE
KERKKQFSQKLIAQARTDIKAGRYESARVNAQEALNVGAEFKPGEDSPQAILRDLERNTS
TQSAQVAQMKNNDSSEIAVIHPGASALELYNLGMQRLAEGNRSSAYQAFLAAYQSGEKLD
THRAQQLQDAVRELAPSRAENIRLVKSQTSAVDPTGTKEPSTIDLVQQKQAIQFSRLRSE
VLNAIFKAERMRESAPTEALGVIDETMSKVESSNLDKKSMTTLIGSLQRTRESIDSFRKQ
VAPLEELKKRNQEVKDHYNKEIKTRIRVEQEVADLVQKFNELIDQRRYAEAEVVAKQAKD
LDPQNPVTVTMEWKARFIRREESNNAMRERKEQNVWNQLNDVEEALADAYTPDIKFGHDA
KEWAELTKRRDKYHAKNHTQKTEKELQIEESLDRPVNLQFESESLAEVMNKIQTLTGINI
FLDSQGLEEEGVTTDAPVTINVNGIKLRSALNLLLEPLNLSYTIDNEVLKITSRIRQQGT
LKTETYPVADLVVPIPNFASNGSMASNPYSQMGAVSYGSGFGGNQAAPGNFQVADPVMGG
IPGGPNPWNNNGSTAQVAGGGSNIDFDSLTELIVSTVEPDSWEEIGGAGSVRPFETTLSL
VIRQTQKVHDEIANLLEQLRRLQDLQVTIEVRFVTVSDRFFERIGVDFDFNVQDTVGGPT
IDDNGNAVPAFGQVDLLGNANQGGQNQQGGQQAQQGQTTTGQTGGPGVAPFSNPPTRTLL
NFDTWPKKGTIAGLSSPESFTPDLDVQFRQGSFEIGVPEFGSFNANAGVNVGLAILSDIE
AFFFINAAQADERSNLLFAPKVTLFNGQVAFVTSNVSRPFVISLVPTVGDFAVGFTPIIA
NIPEGVSLTVSAVISADRRYVRLSVNPNFTNVTDVFTFSFQGGTGGIGQQGQQGQQGQQG
GQLGQQGGGNFGNGVGAGLGGIGGVGGQGGQQGQQGQQGQQGQQGQQGQGGGLGTTTIQQ
PVVEQVTVTTTVSVPDGGTVLLGGVKRLREGRSMAGVPILNKLPYISRLFKNTGVGRETE
SLMMMVTPRIIIQEEEEEALLGY
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atggtgctaaattgggatttcggattaaaattcctacccacactagatagcgaattggaa
gtcatgatgactcctcaaaaaaaacataatcaaagttggtgttctggcttgaaggaggga
cctacattgggcaaggcatttggagtactagcctgtacgacgctggtcgcagcgtcaatg
tggctggccaatctcggcaacacgaccaggaaggtcgctgctgacgttgagaagaatggt
caaccggtttctgggcgtcaacaacgctcagctcgttactatttgagtctagggactcaa
tattacgagagaggacaattcgctgaagcagtagaagtgctggaaaaagcttctgtttct
ccaggacgattgtcatctgcagaatttcgcaagatgaacgattaccttggtcgtgctcgt
cagcgagctgcagctcctcataagaaacagattgtacgagcacagtcgcctacgtctgat
acacgattttctaccaacatttctaatcgagatggtaagtctcctgaagagatgaagcag
cttgcccggcaattgctgcagtctgctcgggaagacataaagctgaatgaatttgccaag
gctcgccaaaaagcaggtcaggttgtatccatgcgtttggagtatggtccttttgatgaa
cgccctgaacaagttctggccgatattgcacgtgcagaacaacgtaatcaaaaagactca
cccattcaacaggctggtggattttcaggacagacttcacgaattgttcaagtcgcaaat
aacgaatctacaaacagcaatccttttggaaatccctttgatggaagtcaaactcaaaat
ttgacagaaaagcaacaggcaacagtgctcttgaagcaggccagacaggcattaaacgca
ggtcactatgatgatgcccgcacacttgcgatccaggctcaggactatgatgttgcttat
aaactgttcgatgaacggcctcaacacattctggctgaaatagaacgaaaaaccggtgcc
aaaatttttgcaggccagtctaaacggtcaatgccggtcgctcaaacttcaccgaacggt
tctgacaaagaacaggcagctcaattactaaagcagtcacgtgctgagctgcaagcaggt
cgctatggctctgctcgtgaattagcacttcaagcaagtcaacttgaagtcgcctatcga
ttatttgatgatcgaccagagttagtactcgatgagatcaagcgtgcccaggcaggtagt
ggttcgttggcagcagccaatactggccgctctacagttactgttcctcaaggctcacct
aaagcacaggcaacagaactactgcggcttgcgcgactggatattaaaaaacgtaacttt
gatagtgcacgtcagaaagtgagtcaggtacagcaaatgcaagtctcttacgacttgttt
gatgaccggccagaattggtacttgccgctatcgatcgaatttctgatgaagcagccact
agttccggcatcaaaggtttgcaacaaaatcaagacgcggtacgtcctcgtatcaatcgt
ttgatggaacgggcacaggttgccttacaacaaggaaataaagatgaagcgctaatgtta
gcctcatcggctcaaaaactcgctcagacgctcaaggtaaaattttcacctgaccgtgaa
tctccagctgaattcatccaacgtgttggtatcagctctgagactagattgaatccggga
accactcaatctgccaaaggtaattccaaccccgagtatgcacgacaattgattgcagca
gctcgcgaggatcttgccaaaaacagagtggaagaagcacgacaaaaagcggaagctgca
caaaagattgatactgcttatacgctgtttgaagatcgtccggaacaggttctggcagac
attcgcaagatggcaggtcaaccgggtgggctttctcgtgatcagctttatgctgcggag
aaagaacgcaagaaacagttttcacaaaaactgatcgctcaggctagaactgatattaaa
gcaggacgttatgaatctgctcgtgttaatgctcaggaagcattgaatgtcggggcggaa
ttcaaacccggcgaagacagtcctcaagctatcctgagagatctggagcgtaacaccagt
acacaatctgctcaggtcgctcaaatgaaaaataatgattcgagtgaaatcgccgtgatt
cacccaggtgcttcagctttagagctttataacctgggaatgcagcggttggctgaaggg
aatcgtagcagtgcttatcaggcatttctagctgcttatcagtctggtgaaaagctcgat
actcaccgtgcacagcagcttcaagacgctgttcgtgagttggctccctctcgtgctgag
aatattcgactggttaagagtcagacgtcagcggttgacccaactggcacgaaagaacca
agtacaattgatctggtgcaacagaaacaggctattcaattcagtcgtctgcgatctgaa
gttctcaatgcgattttcaaagcagaaagaatgcgtgaatctgctcctacggaagctttg
ggagtgattgacgagacgatgtccaaagtggaaagttccaacctcgataaaaaatcgatg
acgacactcattggttctttacaacggactcgtgaatcgattgattctttccgcaagcaa
gttgctcctctggaagagttgaaaaaacgtaaccaggaagtgaaagatcattacaataaa
gaaatcaaaaccagaattcgtgtcgaacaagaagttgctgacttggttcagaagtttaat
gaattgatcgaccagcgacgttatgcagaagctgaagtcgttgccaaacaggccaaagat
cttgatccacaaaatcctgttacagtaacaatggagtggaaagcacgattcattcgacgt
gaagaatcaaataacgcgatgcgtgaacgcaaagagcagaacgtttggaatcagctcaat
gatgtagaagaggcattagccgacgcctatacacctgacatcaaatttggtcatgatgcc
aaggaatgggcagaactaaccaaacgtcgcgataaatatcatgcgaaaaatcatacccag
aaaaccgaaaaagaactccagattgaagaaagcctggatcgccctgtgaatcttcaattt
gaaagtgaatctctggcagaggtgatgaacaagattcagacgttaaccggaatcaatatc
ttcctcgactctcagggattagaagaagagggtgtcacaactgatgctcccgttaccatt
aacgtaaatgggatcaagttgagaagtgcactcaatctgcttctggaaccattgaacctc
tcatacacaattgacaatgaagttctgaaaattaccagccgaattcggcagcagggaaca
ctgaagacagaaacttatccagtagcagaccttgtggttccgattcccaattttgcttca
aatggaagtatggcaagtaacccatacagccagatgggggcagtaagttatggatcaggc
ttcggaggaaatcaagcggcacctgggaacttccaggtagccgaccccgtcatgggtgga
atccccggtggccctaatccttggaataacaacggatctaccgctcaggtagccggtggt
ggttcaaatattgactttgattctcttacggaattgattgtctccactgtagaacccgat
tcctgggaagaaattggtggtgccggtagtgtgcgaccttttgaaacaactttaagtttg
gtgattcgtcaaacgcaaaaagttcatgacgaaattgccaacctgcttgaacagttaaga
agattacaagatctgcaagtcacgattgaagttcgattcgttaccgtctccgatcgattc
ttcgagcgtattggtgtcgattttgactttaatgtccaggatactgtcggaggtcctacc
attgatgacaacggaaacgctgtccccgccttcggtcaagtagatcttttaggaaatgca
aaccagggcggacagaatcaacaaggtggccaacaagcacaacaaggtcaaacgacgacg
ggccagacgggcggaccgggagttgctccctttagtaatccgcccacacgaacgctgctc
aactttgatacctggcctaaaaaaggtacaattgccgggttgagttcaccagaatcattt
acaccagacctggacgttcaattccgacagggatcatttgaaatcggtgtgccggaattt
ggtagcttcaatgcgaacgcaggtgtgaatgttggtttggcaattctgagtgacatcgaa
gccttcttcttcatcaatgccgctcaggcagatgaacggtcaaacctgttgtttgctccc
aaagtgacactgtttaatggtcaggttgcctttgtgactagtaacgtatcacgtccgttt
gtgatcagtctggttccaaccgtaggtgactttgctgtcggattcacacctataattgca
aacattcctgaaggggtttctctgacagtctcagctgtgatctcagcagataggcgatat
gtacgactttctgttaatccgaactttaccaatgttacagacgtcttcaccttctccttc
cagggaggcacaggcggcattggtcagcaaggtcaacaaggtcagcaaggacaacaaggt
ggccagcttggtcaacaaggtggcggtaactttggtaatggtgtcggtgcaggtcttggt
ggtattggtggtgtcggaggccaaggtggccagcaaggccagcaaggccagcaaggtcag
cagggacaacaaggtcagcaaggccaaggtggtggcttaggtacaaccacaattcagcag
cccgttgttgaacaggttactgtaactacaactgttagtgtgcccgatggtggtactgtg
cttctcggtggtgtgaaacgactccgtgaaggtcgcagcatggcgggtgtaccaattctg
aacaagcttccttacatcagtcgtctgtttaagaacacaggtgtcggacgtgaaacggaa
agtttgatgatgatggtcacccccagaatcatcattcaggaagaagaggaggaagcactc
ctcggatactaa
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