Gimesia aquarii: V144x_17850
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Entry
V144x_17850 CDS
T09973
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gaw
Gimesia aquarii
Pathway
gaw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V144x_17850 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaw03400
]
V144x_17850 (mutM)
Enzymes [BR:
gaw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
V144x_17850 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
V144x_17850 (mutM)
DNA repair and recombination proteins [BR:
gaw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V144x_17850 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
QDT96331
UniProt:
A0A517VTJ1
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All DBs
Position
2160985..2161833
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AA seq
282 aa
AA seq
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MPELPEVETMVRGIREVVEGQVISDFRKCPCSCKPISLKPGLKSIRSRVIDQTIVSVRRL
AKRVVLDLESEDSIVIEPRMTGLMLLSNPPDSGHLRLEWVLQKRRSKRSLWFWDRRGLGT
VRLYRKAELLTELGANKLGPDALVISLTDLKARCLKTSRAIKVALLDQKMIAGIGNLYAS
EILHLSQIHPERQANHLSISEVQKMHNAMKRILKTAIRYEGSTLGDGTYRNALNQSGGYQ
NHHRVYNQEGNACKSCKGAQIVRIVQAQRSTFYCPCCQAFKE
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtgccagagctaccggaagttgagactatggttcgggggattcgtgaagtagtggaaggt
caagtcataagcgactttcgaaaatgcccttgttcgtgcaagcctatttcgctgaagcct
ggattgaaatcaattcgatctcgtgtaatcgaccagacaattgtctctgttcgacggttg
gccaaacgtgttgtactggaccttgagagtgaagattcaattgtcattgagcctcgtatg
actggactaatgttgctgtcaaatcctcccgactcaggtcatttaagattggagtgggtt
ttgcaaaaaaggagatccaaaagatcgctttggttttgggaccgtcgtggcttgggaacg
gtccgactttacaggaaagcagagttgttaactgaattaggagcaaacaagttaggccct
gatgcccttgtgatttctctaacagatctgaaggcacgttgtttgaaaactagccgtgca
atcaaggtcgcgttgttggaccaaaaaatgattgcaggtataggtaacctttatgccagt
gaaatccttcacttaagtcagatccatccggagcgacaagcgaatcatttaagcatctca
gaagttcagaagatgcacaatgcaatgaaacgaattctaaaaaccgcaatacgctatgaa
ggctcaaccctgggagatggtacttatcgaaatgcactcaatcaatcaggcggatatcag
aatcatcatcgagtttataatcaggaaggaaatgcttgtaaatcatgtaagggagcacag
attgttcgcattgtacaggcgcagcgttctacgttttattgtccgtgttgtcaggcattc
aaagaataa
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