Gimesia aquarii: V144x_21120
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Entry
V144x_21120 CDS
T09973
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
gaw
Gimesia aquarii
Pathway
gaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V144x_21120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaw03021
]
V144x_21120
03019 Messenger RNA biogenesis [BR:
gaw03019
]
V144x_21120
Transcription machinery [BR:
gaw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
V144x_21120
Messenger RNA biogenesis [BR:
gaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
V144x_21120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATP-cone
AAA_25
OB_RNB
Spore_III_AA
Mor
S1CSD-TOTE-2
Stealth_CR1
Motif
Other DBs
NCBI-ProteinID:
QDT96654
UniProt:
A0A517VUH5
LinkDB
All DBs
Position
complement(2542715..2544148)
Genome browser
AA seq
477 aa
AA seq
DB search
MAKSIKLQTSENDGLVASKEKEELEQKTKRMKANSSEQRAATIAKSADERYEKIKQSEIH
IADLQRMTMQELMKLAKEEKLTEYTGLKKQDLIFKILKERTKVNGLMFGEGTLEILPDGF
GFLRSPDYHYLPCPDDIYVSPSQIRRFGLRTGAIVAGQIRPPKENERYFALLRVEAVNGS
DPELLTTKVFFDDLTPLHPKERLKLSSPAGNLSTRIVDLVAPVGMGQRGLIVSPPRAGKT
VMLQEMAKCVLGSHPNAYVFILLIDERPEEVTDMERQVGGDRCEVVSSTFDEPPSRHIQV
SEMVIEKAKRMVEYGEDVVIFLDSITRLARAWNTEVPHSGKILSGGVDANALQHPKRFFG
AARNVEEGGSLTIVATALVDTGSRMDEVIFEEFKGTGNTELHLDRRMVEKRIWPAIDVNK
SGTRREELLMDEEELRRVWILRRVLNDMNPVDAMELLTNRMRRTKTNEEFLLSMNLG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatccataaaacttcagacatctgaaaatgacgggcttgtggcatcaaaagaa
aaagaagagcttgaacagaaaacaaaaaggatgaaagcaaattcatctgagcaaagagca
gcgacaatcgccaaatcggctgatgaacgttatgagaaaatcaagcaaagcgaaattcat
atcgccgacttgcagcgaatgaccatgcaagaactcatgaaactggccaaagaggaaaaa
ctcaccgaatacaccggcttgaaaaagcaggatcttatcttcaagattctgaaagaacga
accaaagttaacggtttaatgtttggggaaggaaccctggaaattctgccagacggtttt
ggctttttacgcagtcccgattaccactatctcccctgccctgatgacatttatgtctct
ccaagtcaaattcggcgttttgggctacgaactggagccattgtcgcaggtcaaattcga
ccaccaaaagaaaacgaacgctattttgcgctgctcagagtggaggcagtcaatgggagt
gatcccgagttattgacaacaaaagtctttttcgacgatctgacaccactccatcccaag
gaacgcttaaaactatcttcgcccgcaggcaacttgagtactcgcattgtcgatctcgta
gctcccgtgggaatgggacaacgtggcttgatcgtctctccgcctcgtgctggtaagacg
gtaatgttacaggaaatggcaaaatgtgtactcggcagtcatccaaatgcctatgtgttt
attcttttgattgacgagcgccctgaagaagtgaccgacatggaacgtcaggttggtggc
gatcgttgtgaagttgttagtagtacctttgatgaaccacccagtcgacatattcaagtc
tccgagatggtgattgaaaaagctaaacgcatggtcgaatatggtgaagacgttgtcatt
ttcctggattcgattacgcgactggcacgtgcctggaatacggaagttcctcattcagga
aagattctttctggtggtgttgatgcgaatgcattacaacaccccaaacgatttttcggt
gcagcacgtaatgtagaagaaggtggtagccttacgattgttgctacggcactcgtagat
acgggtagtcgtatggatgaagtcatttttgaagaatttaaaggaaccggtaacacagaa
ttgcatctagaccgtagaatggtcgaaaagcgaatctggccggcgattgatgtgaataaa
tcgggcacgagacgcgaagaattgttaatggatgaagaagagctacgtagagtttggatt
ttgagacgtgtgctaaacgacatgaaccctgttgacgcgatggagctattgacaaataga
atgcgtcgtaccaaaacaaatgaagagtttttgctgagtatgaatttaggttag
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