KEGG   Gimesia aquarii: V144x_21120
Entry
V144x_21120       CDS       T09973                                 
Name
(GenBank) hypothetical protein
  KO
K03628  transcription termination factor Rho
Organism
gaw  Gimesia aquarii
Pathway
gaw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gaw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    V144x_21120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gaw03021]
    V144x_21120
   03019 Messenger RNA biogenesis [BR:gaw03019]
    V144x_21120
Transcription machinery [BR:gaw03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     V144x_21120
Messenger RNA biogenesis [BR:gaw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     V144x_21120
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N ATP-cone AAA_25 OB_RNB Spore_III_AA Mor S1CSD-TOTE-2 Stealth_CR1
Other DBs
NCBI-ProteinID: QDT96654
UniProt: A0A517VUH5
LinkDB
Position
complement(2542715..2544148)
AA seq 477 aa
MAKSIKLQTSENDGLVASKEKEELEQKTKRMKANSSEQRAATIAKSADERYEKIKQSEIH
IADLQRMTMQELMKLAKEEKLTEYTGLKKQDLIFKILKERTKVNGLMFGEGTLEILPDGF
GFLRSPDYHYLPCPDDIYVSPSQIRRFGLRTGAIVAGQIRPPKENERYFALLRVEAVNGS
DPELLTTKVFFDDLTPLHPKERLKLSSPAGNLSTRIVDLVAPVGMGQRGLIVSPPRAGKT
VMLQEMAKCVLGSHPNAYVFILLIDERPEEVTDMERQVGGDRCEVVSSTFDEPPSRHIQV
SEMVIEKAKRMVEYGEDVVIFLDSITRLARAWNTEVPHSGKILSGGVDANALQHPKRFFG
AARNVEEGGSLTIVATALVDTGSRMDEVIFEEFKGTGNTELHLDRRMVEKRIWPAIDVNK
SGTRREELLMDEEELRRVWILRRVLNDMNPVDAMELLTNRMRRTKTNEEFLLSMNLG
NT seq 1434 nt   +upstreamnt  +downstreamnt
atggccaaatccataaaacttcagacatctgaaaatgacgggcttgtggcatcaaaagaa
aaagaagagcttgaacagaaaacaaaaaggatgaaagcaaattcatctgagcaaagagca
gcgacaatcgccaaatcggctgatgaacgttatgagaaaatcaagcaaagcgaaattcat
atcgccgacttgcagcgaatgaccatgcaagaactcatgaaactggccaaagaggaaaaa
ctcaccgaatacaccggcttgaaaaagcaggatcttatcttcaagattctgaaagaacga
accaaagttaacggtttaatgtttggggaaggaaccctggaaattctgccagacggtttt
ggctttttacgcagtcccgattaccactatctcccctgccctgatgacatttatgtctct
ccaagtcaaattcggcgttttgggctacgaactggagccattgtcgcaggtcaaattcga
ccaccaaaagaaaacgaacgctattttgcgctgctcagagtggaggcagtcaatgggagt
gatcccgagttattgacaacaaaagtctttttcgacgatctgacaccactccatcccaag
gaacgcttaaaactatcttcgcccgcaggcaacttgagtactcgcattgtcgatctcgta
gctcccgtgggaatgggacaacgtggcttgatcgtctctccgcctcgtgctggtaagacg
gtaatgttacaggaaatggcaaaatgtgtactcggcagtcatccaaatgcctatgtgttt
attcttttgattgacgagcgccctgaagaagtgaccgacatggaacgtcaggttggtggc
gatcgttgtgaagttgttagtagtacctttgatgaaccacccagtcgacatattcaagtc
tccgagatggtgattgaaaaagctaaacgcatggtcgaatatggtgaagacgttgtcatt
ttcctggattcgattacgcgactggcacgtgcctggaatacggaagttcctcattcagga
aagattctttctggtggtgttgatgcgaatgcattacaacaccccaaacgatttttcggt
gcagcacgtaatgtagaagaaggtggtagccttacgattgttgctacggcactcgtagat
acgggtagtcgtatggatgaagtcatttttgaagaatttaaaggaaccggtaacacagaa
ttgcatctagaccgtagaatggtcgaaaagcgaatctggccggcgattgatgtgaataaa
tcgggcacgagacgcgaagaattgttaatggatgaagaagagctacgtagagtttggatt
ttgagacgtgtgctaaacgacatgaaccctgttgacgcgatggagctattgacaaataga
atgcgtcgtaccaaaacaaatgaagagtttttgctgagtatgaatttaggttag

DBGET integrated database retrieval system