Gimesia aquarii: V144x_25470
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Entry
V144x_25470 CDS
T09973
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gaw
Gimesia aquarii
Brite
KEGG Orthology (KO) [BR:
gaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gaw03016
]
V144x_25470 (truB)
Enzymes [BR:
gaw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
V144x_25470 (truB)
Transfer RNA biogenesis [BR:
gaw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
V144x_25470 (truB)
Prokaryotic type
V144x_25470 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
UPF0261_C
Motif
Other DBs
NCBI-ProteinID:
QDT97076
UniProt:
A0A517VVQ1
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All DBs
Position
complement(3074581..3075507)
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AA seq
308 aa
AA seq
DB search
MSSNKAVDLNLSGLLNVHKPQGMTSRQVVNQIQKLVRPLKIGHAGTLDPLAIGVLMVCIG
SATRLIRFVQDQPKEYLGEFILGKRSDTDDISGNVTETTDCPTITREQLERCLPAFQGQI
EQVPPQFSAVHINGQRAYDLARRGKSFEIKPRTVEIYQIELTAFEFPRFQLRIVCGSGTY
IRSLGRDLGEQLKCGAVMTSLVRTRIGDFKLESAMQLDDSMTLESIVAQLQPAERAVKHL
QHYRCNHRELDDLCHGRVIECDPDRLSKAGDQHEIAVVTSAGTLVAIAEWKRDTNQLAPR
QVYYQHSK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagttccaataaagctgtcgatctgaacttatcaggcctattgaatgttcacaaaccg
caaggcatgacttcacgtcaggttgtgaaccagattcagaagctcgtccgtcccctgaag
atcggacacgctggcacactcgaccccttggccatcggggtcctgatggtttgcattgga
tctgcaacacgtctcattcgtttcgttcaagatcaacccaaagaataccttggggaattt
atcttagggaaacgaagcgacacagatgatatttccggaaatgtcaccgaaacaactgat
tgcccaaccatcacacgcgaacaactggaacgttgtttgcctgcttttcaaggacagatc
gaacaggtcccgccacaattttccgcggtgcatatcaacggtcagcgggcctatgatctg
gcacgacgcgggaaatcttttgagatcaaacctcgtacagtcgaaatctatcaaattgaa
ttaacggcgtttgagtttcctcgttttcagttgcgaattgtgtgcggctcgggaacttat
attcgttcccttggccgtgatctgggagaacaacttaaatgtggagcggtgatgacatcc
ctggttcgtacacggattggcgattttaaactggaatcggcaatgcaactcgatgattca
atgactctggaatcgattgtcgcccaacttcagcctgcggaacgagctgttaaacattta
caacattatcgatgcaatcaccgggagcttgatgatctctgccatggtcgtgtcatcgaa
tgcgatcctgatcgactctccaaagctggtgatcaacatgagattgccgtcgtgacttcc
gcaggcacactcgttgcgattgctgaatggaagcgcgataccaatcagttggctcccagg
caagtctattatcaacattctaaatag
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