Gimesia aquarii: V144x_26870
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Entry
V144x_26870 CDS
T09973
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gaw
Gimesia aquarii
Pathway
gaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V144x_26870 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaw03019
]
V144x_26870 (pnp)
03016 Transfer RNA biogenesis [BR:
gaw03016
]
V144x_26870 (pnp)
Enzymes [BR:
gaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
V144x_26870 (pnp)
Messenger RNA biogenesis [BR:
gaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
V144x_26870 (pnp)
Transfer RNA biogenesis [BR:
gaw03016
]
Prokaryotic type
tRNA degradation factors
V144x_26870 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH-I_KHDC4-BBP
KH_KhpA-B
KH_N4BP1_2nd
S1_RRP5
KH_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QDT97215
UniProt:
A0A517VW33
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All DBs
Position
3256247..3258379
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AA seq
710 aa
AA seq
DB search
MKVVVECEVGGQKLSLTTGQLAKQAAGSVLIQYGETVVFVAAATGPGRPGIDFFPLTVDY
RERIAASGKFPGGFLKREGRPTTKEILTARLTDRPIRPLFPKGFHDELQIMSNVMACDGV
NDPDVLSINAASAALCLSPVPFQGPIGAVRVGRIGGELISFPTHEQIAESDLDLIVAGTV
ESVLMIEGFGDQIPEEEMATAIMFAHQELQKICQLQLELREKAGIEPFEYEAPPVNPFIS
KLDDAIYQRLSTAMQSTVKAERREGIKTVHEELVTQFFPEDAEETEDGSTRGQFEEAFHD
LEAKAVRELAMSGRRLDGRAPNELRAVACETGSLPRVHGSALFTRGETQSLATVTLGTSR
DKQRVDGLFEEELQRFMLHYYFPSFSVGECRPIRGPGRREIGHGCLAERSVAPVLPSEED
FPYTIRVISDILESNGSSSMASVCSATLSLMDAGVPLRQPVAGISIGLATEGDKFQILTD
IIGDEDHFCDMDFKVAGTQKGITGIQLDLKNDGISEEIIRATLEQAKQARLELLRTMLTA
IRRPRAEISSFAPRLHQTKINPEKIGLLIGPGGKTIRAIQEETGGTIDIQDDGTVTVSGS
NASVVEKAMAHIEALTEEIRVGRIYDGVVSSIKEFGAFIEIAPGKDGLCHISELSDGFVK
SVNDICKMGDRLQVKVIAVDDQNRVKLSRKAVLAEQAGESNGDLDSEENE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagtagttgttgaatgtgaggttggcggacagaaactgagtcttacaactggtcag
ttagcgaagcaggccgcagggtctgttctgattcaatatggtgaaaccgttgtatttgtt
gctgctgcaacagggcctggcaggccgggaattgatttcttcccacttacggttgattat
cgggaaagaatcgccgcctcaggcaaatttcccggtgggtttttaaaacgcgaagggcgg
cccacaacaaaagaaattttgacggcacgattaacggaccgtcccattcgtcccctgttc
cccaaagggtttcatgacgagcttcaaatcatgtcgaacgtcatggcctgcgatggcgtc
aatgacccagacgtgctttccatcaacgctgcaagtgcggctctctgcttgtctcccgtt
ccctttcagggaccaatcggagccgtgcgagtagggagaatcggtggcgaactgatctca
tttcccacacacgagcagattgctgaaagtgacttggatctgattgtggcgggtacagtt
gagtctgtattgatgatcgaaggttttggcgatcaaattcctgaagaggaaatggcaact
gccatcatgttcgcacaccaagaactacagaagatttgccaattacaattggaactgcga
gagaaggctggtattgagccattcgaatatgaagcacctccggtaaatcctttcatttcc
aagttggatgacgctatctaccaacgactcagtactgccatgcaaagcacagtcaaagca
gagcggcgtgaaggtattaaaacggtgcatgaagaactggtgactcagtttttccccgaa
gatgccgaagagactgaagatggttccactcgcggccagtttgaagaagcgtttcacgat
ctggaagccaaagccgtgcgtgaactcgccatgtcgggacgacgcctggatggtcgtgct
cccaatgaactacgtgctgttgcttgcgaaacgggaagtttaccacgtgtgcatggttct
gccctgtttacacgtggcgaaacacaatcgttggcaacggtcacattgggaacctctcgt
gacaagcaacgcgttgatgggttgttcgaagaagagttgcaacgattcatgttgcattac
tacttcccttccttttcagttggtgaatgccgaccgattagagggccagggcgtcgtgaa
attggtcatggttgtctggcagaacgttctgtggcacctgtcttacctagcgaagaagac
tttccttataccatccgtgtgatttccgatattctggaatcaaatggaagtagttccatg
gcgtctgtctgttcggcgaccctgtcactcatggatgccggagtacctttacgtcaacct
gtcgccggaatctcaatcggtctggcaacagaaggtgacaaattccagattctgacggac
atcattggtgatgaggatcatttctgtgatatggactttaaagtcgctggaactcaaaaa
ggaatcacaggaattcaactggatcttaaaaatgatggaatcagtgaagaaatcattcga
gcgactttagagcaggctaaacaggctcgcttagagttgttgagaacgatgttaactgcc
attcgacggccgcgagcagagatctcaagttttgcacctcggttgcatcaaaccaagatc
aatcctgaaaaaatcggtttactgattggccccggtggaaaaaccattcgtgccatccag
gaagaaactggtggtaccattgatattcaagacgatggtactgtgacggtctccggaagc
aatgcctcagtggttgaaaaagcaatggcccacattgaagctctcaccgaagaaattcgg
gtgggtcgtatttatgatggtgtggtcagctcaatcaaagaatttggtgctttcatcgag
attgctccgggtaaagacggactatgccacatcagtgaactctctgatggatttgtcaaa
tcggtcaatgatatctgtaaaatgggagaccgtttgcaggtgaaggtgatcgccgtcgat
gatcaaaaccgtgtcaagctttcccgcaaagccgttctggctgagcaggctggagaaagc
aatggagatcttgattcggaagaaaacgaataa
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