Gimesia aquarii: V144x_28790
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Entry
V144x_28790 CDS
T09973
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gaw
Gimesia aquarii
Pathway
gaw03410
Base excision repair
gaw03430
Mismatch repair
gaw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V144x_28790 (recJ)
03430 Mismatch repair
V144x_28790 (recJ)
03440 Homologous recombination
V144x_28790 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaw03400
]
V144x_28790 (recJ)
DNA repair and recombination proteins [BR:
gaw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
V144x_28790 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
V144x_28790 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
V144x_28790 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QDT97404
UniProt:
A0A517VWM3
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All DBs
Position
3538991..3540754
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AA seq
587 aa
AA seq
DB search
MTQNWRFAPHDESQVRRLSGEMRISPLLAQVLIARGLQDAAAARSFIDAKMNDLLEPSSM
PGIEDAADRVIAALNAKRRITIYGDYDVDGMTSTSILLQCLTLANGECDYYIPNRLEDGY
GLSCDSIQTLHEEDPQRLVITVDCGITSVKEAALAKELGLELIITDHHQMSDELPEAACL
VHPRLPGSTYEFPHLCGAGVALKLAWAVCQKLGDGQKASPQMREYLKCAVGLAAIGTVAD
VVPLLGENRVLVKYGLSAFTERAPLGLLELLKVAEIKPDQKLDTEDIGFAIAPRLNAAGR
LGQARLAVELLTTTNQDRATQLAAYLDELNKNRRTVERRILKQAKEMVDENEDWADHATL
VLAHADWHPGVIGIVANRVAEHYEKPTVMIALDANSQTGQGSARSFAGFDLHAGFTGCSE
HLIRFGGHQAAAGLKIAEEKIEDFRRAFAEFAACAPQPSDEELQMRIDAEVCLNEITKQA
VQELDRLGPFGQENPRPQFVATRVDLAEPPRTMGEGGRHLSLVFQQHKTKIRAIAFGKGE
WANQMQEDGGPFSISFAPSINKFRGFENVQLHLKDWISEKSTAPLPS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaaactggcgatttgctcctcacgatgaatctcaggtccgccgtctcagtggg
gaaatgcggatctctccacttcttgcccaggtcttaattgcaagaggacttcaagatgca
gctgcggcgcggagcttcattgacgctaaaatgaacgacctgctggagcccagttccatg
ccgggcatcgaagacgcagccgaccgcgtgatcgccgcgctaaatgccaaacgtcgcatc
accatttacggcgactacgatgtggatggcatgacctccaccagcattctgctccagtgc
ttaacattagcaaacggagagtgcgactattacattcccaaccgtctggaagatggatat
ggattaagctgtgactcgattcaaacattgcacgaagaagatccacagcggctcgtcatc
accgtcgattgtggaatcaccagtgtgaaagaagcggcactcgccaaagagctggggctg
gagctgatcatcaccgatcatcatcaaatgagcgatgaacttcccgaggcggcgtgtctg
gtacatccccgcttgcccggcagtacgtatgaatttcctcatctctgcggggcaggggtt
gctttaaagttggcctgggccgtgtgtcaaaaattgggcgatggtcagaaagcatcgcct
caaatgcgcgagtacctcaagtgcgcagtcgggttggcagcgattggaaccgtggcggat
gtcgttcccctgctcggtgaaaaccgagtgcttgtgaaatacggtttaagcgccttcacc
gaaagagcgccgttaggtttgctggaactcttgaaagtcgcggaaatcaagcccgaccag
aaactcgataccgaagatatcggcttcgccattgcgccacgcttgaatgccgcaggtcga
ctggggcaggcaaggctggctgtcgaactgttaaccaccacaaatcaggatcgcgcgact
cagttggcggcttacctcgacgagctgaataaaaatcgcagaaccgtggaacggcggatt
ctcaaacaggccaaagaaatggtcgatgagaatgaagactgggccgaccatgcgacactg
gtcttagcgcatgcagactggcatcccggcgtgatcggcatcgtcgccaatcgagtcgcc
gagcattatgaaaagccaaccgtcatgattgccctggatgcgaactcgcaaactggacaa
ggctccgcgcggtcgtttgcaggctttgatttgcatgccggcttcacaggttgttccgaa
cacctgatccgctttggcggtcatcaggcagccgccggactcaaaatcgcggaagagaaa
atagaggacttccgacgcgcgtttgccgaatttgcagcctgtgcgccacagccctctgat
gaagagttacagatgcggatcgacgccgaagtctgtttaaacgaaatcacaaaacaggca
gtgcaggagctggaccgccttggaccattcggacaggaaaacccacggccccaatttgta
gcgacccgcgttgatctcgcagagccgccgcgcacgatgggagaaggggggcggcatctt
tcattggtcttccagcaacacaaaaccaagatccgcgcgatcgcctttggcaaaggcgaa
tgggccaaccagatgcaggaagacggcggtccattctccatcagcttcgctcccagcatc
aataaatttcgcggtttcgaaaatgtgcagttgcatttgaaagattggatctccgaaaaa
tcaaccgcaccactaccttcctga
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