KEGG   Gimesia aquarii: V144x_35950
Entry
V144x_35950       CDS       T09973                                 
Name
(GenBank) hypothetical protein
  KO
K03628  transcription termination factor Rho
Organism
gaw  Gimesia aquarii
Pathway
gaw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gaw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    V144x_35950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gaw03021]
    V144x_35950
   03019 Messenger RNA biogenesis [BR:gaw03019]
    V144x_35950
Transcription machinery [BR:gaw03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     V144x_35950
Messenger RNA biogenesis [BR:gaw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     V144x_35950
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Spore_III_AA S1CSD-TOTE-2 AAA_25 AAA_22 AAA
Other DBs
NCBI-ProteinID: QDT98111
UniProt: A0A517VYN2
LinkDB
Position
4507198..4508790
AA seq 530 aa
MAAKSSETSDKPKRRRTTKTQKKEEHSGEDTHHQNETDDLQDEYHRKAEDNFEIVESYRS
SKSETESENMSDTPAESIGDNNSEKSETDQSEKTGGNRRRRRRRRKSDGSGQGNGPQGQG
RQGGHNNRGRNNRGGRSRSGNGGRNQSRRPRSTSSAANENISGTIEGVLELHPKAYGFIR
DPKANYKAQDSDAFVSSSLIEKHNLREGILIRGEVGPGTRGQGPRLKSIESIDGRTVEQY
MEIKPFDELTPINPFEQIKLETGAMPITMRVMDLLTPIGKGQRALVVAPPRTGKTMLLQD
IAEAVSKNHPEIRLMVLLIDERPEEVTEMERSIRGEVISSSMDRDVESHVRTSQLIFERG
KRLAEAGEDAFILLDSITRTARAFNKWVGNTGRTMSGGLDVKAMDIPKKMFGTARRFDEG
GSLTVLGTALIDTGSRMDEVIFQEFKGTGNMEMVLSRDLSDRRIFPAIDITLSGTRREEK
ILDPEVMDGVTMLRRSLISLNPVEAMEQLSSTLKKFPTNKEFLEKIRAIL
NT seq 1593 nt   +upstreamnt  +downstreamnt
atggctgctaaaagttctgaaacttcagacaaacccaaacgtcgaagaacaacaaagaca
caaaaaaaagaagagcactcgggagaagacactcatcaccaaaatgaaaccgatgatctg
caagatgaataccatcgtaaagcagaagataatttcgaaattgtcgaaagctatcgatca
tccaagagcgaaacagaatcagaaaatatgtcagacacacctgctgaatcgataggcgac
aataactccgaaaaatcagagactgaccaatctgaaaagacaggtggcaatcgaaggaga
aggcgaagaagaagaaaatcagatggatctggccaaggcaacggtccccagggtcaaggt
cgtcaaggtggacataacaatcgaggtcgcaacaatagagggggccgatcacgttccggc
aatggtggaagaaatcaatcccgacgtcctcgttctacctcttctgcagccaatgaaaac
atctcaggaacgatcgaaggggttcttgaactgcaccctaaagcttacggttttattcga
gacccgaaggcaaactacaaagcacaagactcagatgcatttgtttccagctctcttatt
gaaaaacacaatctgcgtgaaggcatcttgattcgaggagaagttggtccaggcaccaga
gggcaagggccacgtctcaaaagcattgaatcaattgatggtcgaaccgttgaacagtat
atggaaattaagcccttcgatgagttgacccctatcaaccccttcgagcaaattaaactt
gaaactggtgccatgccaattacgatgcgcgtcatggacctgcttacgccaatcggaaaa
gggcaaagggcactcgttgttgctccaccgcgaaccggaaaaacgatgttgttacaagac
atcgcagaggcggtcagtaaaaaccatcctgaaatccgcttgatggtcttattgatcgac
gaacgaccagaagaagtcacagagatggaacgctctattagaggcgaggtcatctcatct
tcaatggaccgagacgtcgaaagtcatgttcgtacaagccagcttatttttgagcgtggt
aaacgcctggctgaagctggagaagatgcattcatccttctggatagtattactcgaaca
gcgcgggcgttcaataaatgggtcggaaatacaggccgtaccatgagcggtggtctggat
gtcaaagcgatggacattcctaaaaagatgttcggaacagcacgacgatttgatgaaggt
ggctctctaactgttttaggaacagcactgattgacaccggtagtcgcatggatgaagta
attttccaggaatttaaagggactggcaatatggagatggttctcagtcgggatctctcc
gaccgtcgcatattccctgctatcgacattacactttcgggtacacggcgtgaagaaaaa
atcctcgatccagaggttatggatggtgtcacaatgcttcgccgaagtttaatttcatta
aatcctgtcgaagcgatggaacagctcagtagcacgctcaaaaaattccccacgaacaaa
gagtttctcgaaaaaatccgagcgatcctgtaa

DBGET integrated database retrieval system