Gimesia aquarii: V144x_35950
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Entry
V144x_35950 CDS
T09973
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
gaw
Gimesia aquarii
Pathway
gaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V144x_35950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaw03021
]
V144x_35950
03019 Messenger RNA biogenesis [BR:
gaw03019
]
V144x_35950
Transcription machinery [BR:
gaw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
V144x_35950
Messenger RNA biogenesis [BR:
gaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
V144x_35950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Spore_III_AA
S1CSD-TOTE-2
AAA_25
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
QDT98111
UniProt:
A0A517VYN2
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All DBs
Position
4507198..4508790
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AA seq
530 aa
AA seq
DB search
MAAKSSETSDKPKRRRTTKTQKKEEHSGEDTHHQNETDDLQDEYHRKAEDNFEIVESYRS
SKSETESENMSDTPAESIGDNNSEKSETDQSEKTGGNRRRRRRRRKSDGSGQGNGPQGQG
RQGGHNNRGRNNRGGRSRSGNGGRNQSRRPRSTSSAANENISGTIEGVLELHPKAYGFIR
DPKANYKAQDSDAFVSSSLIEKHNLREGILIRGEVGPGTRGQGPRLKSIESIDGRTVEQY
MEIKPFDELTPINPFEQIKLETGAMPITMRVMDLLTPIGKGQRALVVAPPRTGKTMLLQD
IAEAVSKNHPEIRLMVLLIDERPEEVTEMERSIRGEVISSSMDRDVESHVRTSQLIFERG
KRLAEAGEDAFILLDSITRTARAFNKWVGNTGRTMSGGLDVKAMDIPKKMFGTARRFDEG
GSLTVLGTALIDTGSRMDEVIFQEFKGTGNMEMVLSRDLSDRRIFPAIDITLSGTRREEK
ILDPEVMDGVTMLRRSLISLNPVEAMEQLSSTLKKFPTNKEFLEKIRAIL
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaaagttctgaaacttcagacaaacccaaacgtcgaagaacaacaaagaca
caaaaaaaagaagagcactcgggagaagacactcatcaccaaaatgaaaccgatgatctg
caagatgaataccatcgtaaagcagaagataatttcgaaattgtcgaaagctatcgatca
tccaagagcgaaacagaatcagaaaatatgtcagacacacctgctgaatcgataggcgac
aataactccgaaaaatcagagactgaccaatctgaaaagacaggtggcaatcgaaggaga
aggcgaagaagaagaaaatcagatggatctggccaaggcaacggtccccagggtcaaggt
cgtcaaggtggacataacaatcgaggtcgcaacaatagagggggccgatcacgttccggc
aatggtggaagaaatcaatcccgacgtcctcgttctacctcttctgcagccaatgaaaac
atctcaggaacgatcgaaggggttcttgaactgcaccctaaagcttacggttttattcga
gacccgaaggcaaactacaaagcacaagactcagatgcatttgtttccagctctcttatt
gaaaaacacaatctgcgtgaaggcatcttgattcgaggagaagttggtccaggcaccaga
gggcaagggccacgtctcaaaagcattgaatcaattgatggtcgaaccgttgaacagtat
atggaaattaagcccttcgatgagttgacccctatcaaccccttcgagcaaattaaactt
gaaactggtgccatgccaattacgatgcgcgtcatggacctgcttacgccaatcggaaaa
gggcaaagggcactcgttgttgctccaccgcgaaccggaaaaacgatgttgttacaagac
atcgcagaggcggtcagtaaaaaccatcctgaaatccgcttgatggtcttattgatcgac
gaacgaccagaagaagtcacagagatggaacgctctattagaggcgaggtcatctcatct
tcaatggaccgagacgtcgaaagtcatgttcgtacaagccagcttatttttgagcgtggt
aaacgcctggctgaagctggagaagatgcattcatccttctggatagtattactcgaaca
gcgcgggcgttcaataaatgggtcggaaatacaggccgtaccatgagcggtggtctggat
gtcaaagcgatggacattcctaaaaagatgttcggaacagcacgacgatttgatgaaggt
ggctctctaactgttttaggaacagcactgattgacaccggtagtcgcatggatgaagta
attttccaggaatttaaagggactggcaatatggagatggttctcagtcgggatctctcc
gaccgtcgcatattccctgctatcgacattacactttcgggtacacggcgtgaagaaaaa
atcctcgatccagaggttatggatggtgtcacaatgcttcgccgaagtttaatttcatta
aatcctgtcgaagcgatggaacagctcagtagcacgctcaaaaaattccccacgaacaaa
gagtttctcgaaaaaatccgagcgatcctgtaa
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