Gimesia aquarii: V144x_41110
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Entry
V144x_41110 CDS
T09973
Symbol
lcfB_4
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gaw
Gimesia aquarii
Pathway
gaw00061
Fatty acid biosynthesis
gaw00071
Fatty acid degradation
gaw01100
Metabolic pathways
gaw01212
Fatty acid metabolism
gaw02024
Quorum sensing
gaw04146
Peroxisome
Module
gaw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gaw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
V144x_41110 (lcfB_4)
00071 Fatty acid degradation
V144x_41110 (lcfB_4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
V144x_41110 (lcfB_4)
09145 Cellular community - prokaryotes
02024 Quorum sensing
V144x_41110 (lcfB_4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gaw01004
]
V144x_41110 (lcfB_4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaw04147
]
V144x_41110 (lcfB_4)
Enzymes [BR:
gaw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
V144x_41110 (lcfB_4)
Lipid biosynthesis proteins [BR:
gaw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
V144x_41110 (lcfB_4)
Exosome [BR:
gaw04147
]
Exosomal proteins
Exosomal proteins of breast milk
V144x_41110 (lcfB_4)
Exosomal proteins of breast cancer cells
V144x_41110 (lcfB_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
PP-binding
AMP-binding_C_3
ACP_SdgA_C
NBAS_11th
Motif
Other DBs
NCBI-ProteinID:
QDT98604
UniProt:
A0A517W022
LinkDB
All DBs
Position
complement(5150433..5152538)
Genome browser
AA seq
701 aa
AA seq
DB search
MNICEHLTVSAQIFPEREALVFNGIRFTYAELEHLSSQAACYLQEFAVHPGDRVAIALPN
TPAFVVWYYAVLRVGAIAVSVSTRLTPQEIRFIVEDCTAVALVVVESKSVDLQSQMPACM
QHLISVSEAGDKISDEFLSVSESGPIDIYPTKPDDPAVILYTSGTTGFPKGATLSHQNVR
ATVHAFNNLCGLNQDDRILCSVPLFHCYGQNALLNSGFHAAATIVLQQRFDLNESKSLIM
DEGVNKLFGVPTMFQLLEETCSLEDLKSINYCFSAATTLPQIVAERWQQKFKMPIYEGYG
LTETAPFASYNHRLKFIPGSIGSPVDLVEMKVVHTETGETCVPGELGEIVVRGPNVMLGY
WNRPDDTAIAIRDGWFHSGDIGRIDEQGYFYIVDRVKDMISIAGLKVFPAEVERTLHEHA
AISDVAVVGLADAILGEKVVAFIVLAKDLQTGSEVTHTEVLEQLREFCQQNLASYKMPKH
LLLIDELPRNPSGKVLKRVLREQAESMITETQQEIQPKTDIDVSVSTEESEREAAKQKVH
SAWVMEMLKSHPANRLREITSMLQLDVQQMLQLDELPNADERFIEAGLDSLLIVDLQERL
KQRLGHAVDLPATLVFDYPSIAELAAFLSSILEEIHSNDDSDRETSGSSVSREQTVKIPQ
KEGGGDILFTDNPSETSDLEAEIEGLSEQEALEQLIRELKN
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaatatctgtgaacacttaacggtatcggcacaaatttttcctgagcgtgaagcactc
gtatttaatggaatccgttttacttatgctgagcttgaacacctaagcagtcaggcagcc
tgctatttgcaagagtttgcagttcaccctggggatcgagtagcaattgcgctaccgaat
acacccgcttttgtagtctggtattatgcggttttgcgtgtcggtgcgattgctgtttct
gtgagtacgcggctgactcctcaggaaattcggtttattgttgaagattgtactgcagtg
gcactggtcgtcgtcgaatccaaatcggtcgatttacaatcacagatgccagcttgtatg
cagcatttgatttcggtttctgaggctggtgataaaatttccgatgaatttctcagcgtc
agcgaatcaggccccattgacatttatccgaccaaaccagacgatccggcagtcattctc
tacacatctgggaccactggttttcccaaaggggcgacgttgtcacatcaaaatgtacgg
gcaaccgtgcacgcctttaacaatttgtgtggtttaaatcaggatgatcgcattctctgt
agtgtgcctttattccattgttatggtcagaacgcgttactgaattctggtttccatgca
gcggcaaccattgtattacagcagcgttttgatttgaatgaatccaaatccttaatcatg
gatgaaggggtgaataagctgtttggtgtgccaaccatgtttcaattactcgaggaaaca
tgcagcctcgaagatttaaaaagcattaactattgtttctcggccgcaacaaccttacca
caaattgtcgctgaacgctggcaacagaaattcaagatgccgatctacgaaggctatggt
ttaaccgaaactgcaccttttgccagttataatcatcgtttgaaatttatccctggatca
attgggtctcccgttgatctggttgaaatgaaagtggttcatactgagacaggtgagact
tgtgtacccggagaattaggagagattgtggttcgtggtcccaatgtgatgctgggatat
tggaatcgtcccgacgatacagcgattgcaatccgcgatggttggtttcattctggtgat
attgggcggattgatgagcagggttacttctatattgtcgaccgtgtaaaggatatgatt
tcaatcgcagggctcaaagtctttccggcagaagttgaaagaaccctgcatgaacatgcc
gcaatttcagatgtagcagtggttggattagcagatgccattttgggtgagaaggttgtt
gcgttcattgtgctagccaaggatcttcaaactggttccgaagtaacgcatactgaggtc
cttgagcagcttcgtgagttctgtcagcaaaatcttgcgagctataagatgcccaagcat
ttattgctgatcgacgaattgccgcggaatccttcgggtaaagtactcaagcgggttctg
cgcgaacaagcagaatcgatgattactgaaacgcagcaagagatacagcccaaaactgac
atagatgtttcagtatcaacggaagagtcagagcgggaagctgcgaagcagaaagttcac
tcagcctgggtgatggaaatgctaaaatcacatccggcgaatcgattgcgtgaaattact
tccatgctccaactggatgtgcaacagatgctgcagttggacgaactaccgaatgctgac
gaacgttttattgaagcaggcctcgattctttgttgattgtcgatttgcaggaacggttg
aaacaaaggctcggtcacgctgtcgatttaccagcgacattagtattcgattatcccagc
attgcagaattggccgcttttttgtcgtcaattcttgaagaaattcattccaacgacgat
tcagatcgcgaaacttctggaagcagtgtgagtcgtgaacagactgtcaaaatacctcaa
aaagaaggtggtggtgacattttgtttactgataatcccagtgaaacatccgatttggaa
gctgaaattgaagggttatcagagcaagaggctttagaacagctgattcgcgaattgaaa
aattga
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