Gimesia aquarii: V144x_45030
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Entry
V144x_45030 CDS
T09973
Symbol
yhaM_2
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
gaw
Gimesia aquarii
Brite
KEGG Orthology (KO) [BR:
gaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaw03019
]
V144x_45030 (yhaM_2)
Messenger RNA biogenesis [BR:
gaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
V144x_45030 (yhaM_2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HD-CE
Cas3_HD
Nuf2
RMI2
Matrilin_ccoil
Motif
Other DBs
NCBI-ProteinID:
QDT98993
UniProt:
A0A517W159
LinkDB
All DBs
Position
complement(5694832..5695803)
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AA seq
323 aa
AA seq
DB search
MSRQYINQLKDGDTVNEVYLLVDKQLRANRNASLFLSADLRDCTGVVNARMWNVLEERMQ
HFQAGNYVQVKGKVHLFQGALQVILTYIEPVPAENLDPAEFQPQASQDVQKLLAQLREIL
LGIDNNEIRTLMECFLVDETLMEEFCKAPAGVKTHHAYHGGLIEHVVNLMETAQRMADLY
PKVDLSLLLAGIFLHDIGKVRELGYENEFVYTDEGQLLGHLIIGVEMLTEKVNAYQEMTG
ESFPREAELRLKHMIVSHHGTYEFGSARLPMTPEAVALHHLDNLDAKVNEFARFIDDDLN
STSSWTPYSPRLQRKLFKGMTED
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcaatatataaatcaattgaaggatggtgatacggtaaatgaagtttacctg
ttagttgataagcagttacgtgcaaatcgcaatgccagcctttttttgtcagcagattta
agagattgtacaggagttgtgaatgcccgcatgtggaatgttcttgaagaacgcatgcag
cattttcaggcaggcaactatgtgcaggtgaaggggaaggtgcatctttttcaaggcgcg
ttacaggtgatcttaacctatatcgaacctgtacctgcagaaaacctggatccggctgaa
tttcaacctcaagcctcacaggatgtgcaaaagctattggctcaactgcgtgagatctta
ctgggcatcgataataatgagattcggactttaatggagtgttttctcgttgatgaaacg
ctcatggaagaattttgcaaagcacctgccggggtcaaaactcaccatgcttatcatggt
ggcttgattgagcacgtcgttaatctgatggaaactgctcagcgaatggccgatttatat
cccaaagttgatctcagtctcctgttagcggggattttcttacatgatatcggaaaagta
cgtgaactcggttatgaaaacgaattcgtgtataccgatgaaggacagctattaggtcat
ttgatcatcggcgtggagatgttgacggaaaaggtgaatgcctatcaggaaatgacggga
gaatcgtttccgcgggaggcggaacttcgactgaaacatatgatcgtcagtcatcatggt
acctatgagtttggcagtgctcgcttgccgatgacccccgaagcagtggcattacaccat
cttgataatttagacgccaaggtaaatgagttcgcacgatttattgatgatgatctgaat
tcgacatcaagctggaccccttattcgccccgcttgcagcgaaaattatttaagggaatg
accgaggattaa
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