Gimesia aquarii: V144x_46900
Help
Entry
V144x_46900 CDS
T09973
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gaw
Gimesia aquarii
Brite
KEGG Orthology (KO) [BR:
gaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaw03032
]
V144x_46900 (topA)
03400 DNA repair and recombination proteins [BR:
gaw03400
]
V144x_46900 (topA)
Enzymes [BR:
gaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
V144x_46900 (topA)
DNA replication proteins [BR:
gaw03032
]
Prokaryotic type
DNA Topoisomerases
V144x_46900 (topA)
DNA repair and recombination proteins [BR:
gaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
V144x_46900 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
DUF2992
HC2
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QDT99180
UniProt:
A0A517W1P7
LinkDB
All DBs
Position
complement(5952725..5955466)
Genome browser
AA seq
913 aa
AA seq
DB search
MAKKKLKALVIVESPAKAKKIGGYLGSKYRVLASMGHVRDLPAKASDVPSEFKKKHKWAT
LGVNTESEFEPYYLVPKEKKKTVKELKDALKDAEELILATDEDREGESIGWHLTELLKPK
VPVKRMVFSEITEDAIQEAIANPRELDLNLVSAQETRRVLDRLYGFTLSPLLWKKVARGL
SAGRVQSVAVRILVQRELERLAFRSGTYWDLKALLKTSDGAEFESMLSAVGGKKVASGKD
FDESTGKLKADADVLLLNEQQADELLERVKKSDWTVTSVEQRLQSRKPPAPFTTSTLQQE
GNRKLNMSARETMQVAQRLYEDGHITYMRTDSVNLSNEAISASRDRIEDLYGKDYLNPEI
RRFDTKSKGAQEAHEAIRPAGKSMKTAEEIGLKGQQAKLYAMIWKRTMATQMEEAKLRFQ
TVTITADNAEFRATGRHVEFPGFFRAYVEGVDDPEAALDDSESMLPPLEENQALEANQVD
PLKHETKPPARYTEATIVRKLESEGVGRPSTYASIIGTIQDRGYVKKSGSQLVPTFTALA
VTRLLEQFFPNLVDLQFTAAMEQELDDIAVGEGDRLPYLNQFYRGKEGLDEQVKSKEETI
DAREICTLNLEGIESAVRVGRYGPYVTDGAEEEPVSASIPDNIAPADLTNELAEKLIRQK
SEGPKSLGMHPEENTPIYKLFGPFGPYLQLGDVIEDGPKPKRVSIPKTVDPDTIGLEEAL
KYLSLPRFLGEHPETGKKVNAGIGRFGPYVLHDKVYKSLTKDDDILTIELPRAVELLKQA
RQRSAPTPIRELGKHPEDEETVAIFDGRYGPYVKHGKINATIPKGYEVENVVLEQALEWL
EAKAAKKGTKKKAAKKKTTKKSAGTKAKKTAAKKTPAKKAKAAAKKTTKKAAAKKKTTKK
AAKKKSAKKKTAE
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaagaaaaagctgaaagcattggtgatcgttgaatcaccggccaaagccaagaaa
atcggtggctatttaggcagtaaatatcgggtcctggccagtatggggcacgtacgtgat
ttgcctgcaaaggcttctgatgttccttccgaattcaagaaaaagcacaaatgggccacc
ttgggggtcaataccgagtcagaatttgagccttattatctggtacccaaagagaagaaa
aagacggtaaaggaactcaaagacgctctaaaggatgccgaagaactcattcttgcgact
gacgaagaccgtgaaggtgaaagtatcggttggcatctgactgagctattgaaaccaaaa
gtacccgtaaaacgcatggttttctctgaaatcacagaagatgccattcaggaagcgatt
gctaatccgcgtgaacttgatttgaatctggtctctgcccaggagacgagacgtgtactg
gaccgtttgtatggatttacattaagccccctactttggaaaaaggttgcccgtggactc
tctgccgggcgtgtgcagtctgtcgcggtccgaattctggtccagcgagagctggaacga
cttgcgtttcgaagtggtacctattgggacttgaaggcattattaaagacttccgatgga
gccgaatttgaatcgatgctctcagcggtcggaggcaaaaaagttgccagcggtaaagat
ttcgacgagtccacaggcaagctgaaggccgatgcggatgtgttgttgttgaatgagcag
caggcagacgaattgctcgaacgtgtcaaaaagtctgattggactgtcacttcagtcgaa
caacgactgcaatcacgcaagccccctgcgccgtttactaccagcacgttgcaacaggag
gggaaccgcaagttgaacatgtcggcccgtgaaacgatgcaggttgcgcaacgtttatac
gaagatggccacattacttatatgcgtactgacagcgtgaatctctcgaatgaagcgatt
tctgcatcgcgagatcggattgaagatttatatggtaaagattatctcaacccggagata
aggcgttttgatacgaagtccaaaggcgcccaggaagcacacgaagcgattcgccccgcc
ggtaaatcgatgaaaacggccgaagaaatcggactaaagggacaacaagccaaactgtat
gcgatgatctggaaacggacgatggccacacaaatggaagaagccaagctgcgttttcaa
acagtgaccatcacagccgataatgctgagtttcgtgccacaggacgccatgtggaattt
cctggcttcttccgtgcctacgttgaaggggttgacgatccggaagccgctttagacgac
agtgaatcgatgctgccaccgctggaggaaaatcaggccctcgaagccaaccaggttgat
cccctcaagcacgaaacaaaaccccccgcgcgttatacagaagcgaccatcgtgcggaaa
ttggagagtgaaggagtgggtcgaccgagtacgtacgcttccatcatcggaaccattcag
gatcgcggctatgtgaaaaagtcaggtagccaacttgtgcctacgtttaccgcactggca
gtcactcgcttactggaacagtttttccccaatctggtggatctacaatttacggccgcc
atggaacaggaattagacgatatcgccgtcggcgaaggggatcgtttaccgtatttgaac
caattctaccgcggaaaagaaggcctcgatgaacaggtcaaatccaaggaagaaacaatc
gatgcgcgggaaatctgtacgcttaatttggaagggattgagtcggcagtgcgtgtcggt
cgttatggaccgtatgtcaccgatggcgcagaagaagaacctgtttccgcttcgattccc
gacaatatcgcaccagcagatctcaccaatgaacttgcagaaaaattgattcgtcagaaa
agcgaagggccgaagtcactcgggatgcatcctgaagaaaacacgcccatttacaagtta
tttggtccttttggtccctacctgcaattgggagatgtgattgaggatggaccaaaacca
aaacgcgtcagtatccctaagacggtcgacccggacacgatcggtctggaagaggcgctc
aaatacttgagcctgccgcgttttttaggtgagcatcccgaaacaggaaagaaagtcaac
gcgggcattggtcgcttcggtccctatgtcttgcacgacaaggtctacaaatctctgacg
aaggatgatgacattctgacgattgagttacctcgcgctgtggaactcttaaagcaggcg
cgtcaacgaagtgcaccgacacccattcgtgaattaggaaaacatccggaagacgaagaa
acggttgccatttttgatggtcgctatgggccttatgtgaaacatggcaaaatcaatgcg
accattcccaaggggtacgaagttgaaaatgtggtgctagaacaggcgctcgaatggttg
gaagcgaaagcagctaaaaaaggtacaaagaagaaggccgccaagaaaaagacaactaag
aaatcagcggggaccaaggcgaaaaaaacagccgcaaagaaaacacctgccaagaaagcg
aaagcagctgcgaagaaaaccacaaaaaaagcggcagccaaaaagaagacaacgaaaaaa
gcagctaagaagaaatccgccaagaaaaaaactgctgaataa
DBGET
integrated database retrieval system
