Gimesia algae: Pan161_00060
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Entry
Pan161_00060 CDS
T09989
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
gax
Gimesia algae
Brite
KEGG Orthology (KO) [BR:
gax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gax03016
]
Pan161_00060 (truD)
Enzymes [BR:
gax01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Pan161_00060 (truD)
Transfer RNA biogenesis [BR:
gax03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pan161_00060 (truD)
Prokaryotic type
Pan161_00060 (truD)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
Anamorsin_N
Ribosomal_L27
Motif
Other DBs
NCBI-ProteinID:
QDT88390
UniProt:
A0A517V5W0
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All DBs
Position
complement(6246..7316)
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AA seq
356 aa
AA seq
DB search
MPEPETEVLPYLTEGLPGTGGELKQTPEDFLVEEIPVYSPSGEGDHLFLWVEKRDVSAQF
LVKVLSEKLRVDSREIGVAGLKDRCAITRQMVSVPAECEPLLEGFAFAGIRILQATRHER
KLKTGHLKGNRFTLLLKTTTENAFANANAILEKIKATGFPNYYGSQRMGRDNETQRMGMK
LLKNEKVSAKYFRNKSMKRLALSAAQSSLFNRALSQRVSAQNLHTVQRGDIMQVCESGGL
FVVEEVAAEQQRFDQRETVITGPIFGPKMKQPTDQVLEAETAILQDFSLEPAYFSRFKKL
TPGARRPFLIWPEDLKINQTADGIQFDFTLPSGVYATMLLREFMKNETAVMSPGDS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaccagaaactgaagtactcccctatctgacggaaggcttaccgggaaccggc
ggtgaattaaagcagactcccgaagactttctcgtggaagagattccggtttactctcct
tccggcgaaggcgatcacctgtttctgtgggtagaaaaacgggatgtctcggcgcagttt
ctggtgaaggttctgtcagaaaaattgagagtcgactcgcgggaaattggagtggccggc
ctgaaagaccgctgtgcaatcacgcggcagatggtttctgttcccgcggaatgtgagccc
ctgctggaagggtttgcctttgcaggaattcgcattctgcaggcaactcgccacgaacgt
aaactgaaaacaggtcatctcaaaggcaatcgctttacacttttattgaaaacgaccact
gagaatgcgttcgccaacgcgaatgccatcctggagaaaatcaaagcgaccggctttccc
aactattatggttcacagagaatgggccgggataatgaaacacagcgaatgggcatgaag
ctcttaaaaaatgaaaaggtttccgccaagtattttcggaacaagtccatgaagcggctg
gcgttgtcagcggcgcaatccagcctgtttaatcgggctttgtctcaacgggtctctgcg
caaaacctgcatacggttcagcggggcgatatcatgcaggtttgtgaatcggggggtctg
tttgtcgtcgaggaggtcgctgcagagcaacagcggtttgatcagcgggaaaccgtgatc
accggtccaattttcgggccgaaaatgaaacagcctaccgatcaggttctggaagcagaa
accgcgatcctgcaggatttttctttggagccggcttatttttcgcgtttcaaaaaactg
actccaggtgcccgccgaccattcctgatctggcctgaagatcttaaaatcaatcagacg
gcggacggcatccagttcgattttacgctgccttccggcgtgtatgcgaccatgctactc
agggaatttatgaaaaacgagacggctgtcatgtcaccaggcgactcgtaa
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