Gimesia algae: Pan161_00940
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Entry
Pan161_00940 CDS
T09989
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gax
Gimesia algae
Pathway
gax03420
Nucleotide excision repair
gax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pan161_00940 (pcrA_1)
03430 Mismatch repair
Pan161_00940 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gax03400
]
Pan161_00940 (pcrA_1)
Enzymes [BR:
gax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pan161_00940 (pcrA_1)
DNA repair and recombination proteins [BR:
gax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pan161_00940 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
Pan161_00940 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
AAA_11
PcrA_UvrD_tudor
Tudor_1_RapA
ResIII
Motif
Other DBs
NCBI-ProteinID:
QDT88478
UniProt:
A0A517V640
LinkDB
All DBs
Position
complement(117310..119577)
Genome browser
AA seq
755 aa
AA seq
DB search
MDFQQVLTPPQFAAVSHHQGPLLVLAGPGSGKTRVITHRIASLIHAHVPAHQILGITFTN
KAADEMGERVRQLIPDSRVEISTFHKFCVKILRRYGRGVGLDSNFSIFDTTDQHQLIRFV
LNELDIDTVAYNPSTIASMISRAKNDLITVERFVEIYQESVGDHLQAVAARVYPMYQKLL
LESNAVDFDDLLLHVASLLKGSPELRATLDERYQYILVDEYQDTNLAQYQIVMGLSLNTR
NLCVTGDPDQSIYGWRGAKIENILQFERDFPDCKTIRLEQNFRSTKEILRVADDLISHNQ
RRKAKSLFTENQDGSPVELLCFQDERHEADDIARRIRNAIDQGDHAYTDFAIFYRVNSLS
RELELALARHKIPYQLAGSVAFYERTEVKDLLSYLKLVNNPDDRIAFSRIVNKPLRGIGK
TTQNKLIRWADERGISLLEAAHQAADCPKLSKRAATMLARFAKMINGFSMADSGAVAHLM
ENIIDSTRLVDSWKESPDEDDQQRIANVNELLSTAKKYDDIYGEETTLEGFLEVSTLASA
TDQLDADAGRVTLMTLHAAKGLEYPVVFIIGVEQNLIPHERVLREELRDGLEEERRLFFV
GITRAEQCLYLTQTRERSMRGRPWRTITSDFLKEIDVKLNDQTTDELFESRSHFDEFVES
VKRGEIDTAALKAANPKRPLLMTGADLLKDSPQAAEIPQGFSVGMRVRHPRYGVGTVMSI
SGYARKRMVNVLFDDADEPQTFVAAHCPLQPLGLR
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
ttggattttcagcaggtcctgactccacctcaattcgctgccgtctcgcatcaccaggga
ccattactggtcctggcgggaccgggctcaggaaaaacccgtgtgattacccaccggatc
gcctcgctgattcatgcgcacgtacccgctcatcagattctgggaattactttcaccaac
aaggcggcggatgaaatgggcgaacgggtcaggcagctgattcccgattcgcgcgtggag
atttccacctttcataagttctgcgtcaaaatcttgagacgttacggacgcggcgtgggg
ttggacagtaacttctcgatttttgacacgaccgatcaacatcagttaattcgtttcgta
ctgaatgaattagacatcgataccgtggcctataatccatcgaccatcgcatcaatgatc
agccgtgccaaaaatgacctgatcaccgttgagcgattcgtcgaaatctatcaggaatcg
gtgggcgatcacctgcaggccgtcgcggcccgcgtatatccgatgtatcagaaactgctg
ctcgaatccaatgccgttgactttgacgacttattactgcatgtcgccagcctgctcaaa
ggctcccccgagttacgggcgacactcgatgaacgttatcaatatattctcgtagatgaa
tatcaggatacgaacctggcccagtatcagatcgtaatgggactctcgctcaacacgcgc
aacctgtgcgtcactggtgacccggaccagtcaatttatggctggcgcggtgcgaaaatt
gaaaacattctacagttcgaacgggattttcccgactgtaaaacgattcgactcgaacag
aattttcgcagtacgaaagaaattctccgcgtcgccgacgatctgatttctcacaatcaa
cgccgcaaagccaagtcgctgtttacggaaaaccaggacggttctccggtcgagctgctc
tgttttcaggatgaaaggcacgaagcagacgatatcgcgagacgcattcgcaatgccatc
gatcagggagaccatgcatacacagatttcgccattttttaccgggtcaactcgctttcg
cgtgaactggagctggcgctggcccggcataaaataccctaccagctggcgggcagtgtc
gccttttatgaacgcacggaagtcaaagacctgctctcctacttgaaactggtcaacaac
cccgacgatcgcatcgcgttctcacgtattgtcaataagcccctccgaggcatcggcaaa
acaacgcagaataaactgattcgctgggccgacgagcgcgggatcagtctgctggaagcc
gcccatcaggcagcagactgcccgaaactttccaaacgggcagcgaccatgctggcgcgg
tttgccaagatgatcaacggattttcgatggccgattcgggagccgtcgcgcatctgatg
gaaaatatcatcgatagtacgcggttggtcgacagctggaaagaaagtccggacgaagat
gatcagcaacggattgcgaacgtcaacgaactgctctccactgccaaaaagtatgatgac
atctacggtgaagaaacgacactggaaggttttctggaagtcagtacgctggccagcgcg
acggaccagctggatgcggacgcggggcgtgtgaccctgatgacgctgcatgcggcgaaa
ggactggaatatccggtggtgtttattatcggtgtcgaacagaacctgattccgcacgaa
cgggtgctgcgtgaagaactgcgcgacggactggaagaagaacgccgcctgttttttgtg
ggaatcacccgggcggaacagtgcctgtatctgacccagacacgtgaacgttcaatgcgc
ggtcgtccgtggagaaccatcaccagtgacttcctcaaagaaatcgatgtaaagctcaac
gatcagacgactgatgaactgtttgaatcccgctcgcactttgatgaatttgtggaatcc
gtcaagcgaggcgagattgacaccgccgctttgaaggcagccaatccaaagcgtcctctg
ttgatgaccggcgcggacctcctcaaggattcaccacaggccgctgagattccgcagggt
ttctcggtcggcatgcgggtcagacatccgcgctatggcgtaggaacggtgatgagtatc
agcggttatgcccgcaaacggatggtgaatgtcctgtttgacgatgcagacgaaccgcaa
acctttgtcgccgcgcactgccccctgcaaccgctaggactgcgataa
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