Gimesia algae: Pan161_14270
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Entry
Pan161_14270 CDS
T09989
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gax
Gimesia algae
Brite
KEGG Orthology (KO) [BR:
gax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gax03400
]
Pan161_14270 (addB)
Enzymes [BR:
gax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pan161_14270 (addB)
DNA repair and recombination proteins [BR:
gax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Pan161_14270 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
UvrD_C
UvrD-helicase
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QDT89795
UniProt:
A0A517V9W9
LinkDB
All DBs
Position
complement(1823163..1826543)
Genome browser
AA seq
1126 aa
AA seq
DB search
MQPDVQILTGIAGSGKTDRLLDEYRRTLQEGLKQHAPGKTLWISPTVRSRKQVLDQLLSP
EMPVCFAPHVFTFEAFAETILQSLDQPVQTLPEISKRYLLRSIVDDLIAAGQIQYFSSIA
GTSGFLDLISHFISELKREEIWPEQFSEACARLKMDSRQKDQELALIYDRYQVALHEMRR
YDSEGRFWSARTALQEGMWGPFGQFDLIVLDGFADFTHTQYEILELLAARTSRLLISLPL
ENELRRQDLFAKSVVARQVLERRLPKTIQIVACERNEPASSRSQICEALFDNPREMKPSK
AAEHIKVLAVAGQRNELEVLAVEVKQLLLQGVHPEEISLVFRSTLEYGDLIHETLSAAGI
PYFLGQEQEFSRFPVIRAIFAFLQIELDNWSFDSLMSILDSNYFSPDWPEFKSGTAVRSL
SRILRQLKIDSGKTDILNALEKECRKAAELHARYPDQPKRQAILEEVESAYQLAKRLSSE
TQRLRGKELFVTWIDVLTSLANEFGLPKAWSNEDARTEALDQRDQLVWERFQKLLFHAVS
EVDQIEQFHQREAAPQDLITFRSLLLDLLEQQTLALQTEEAGRIQVLDASQLRNLSVPYL
LVGGLSEASFPRSHREDCLYSEKDRGELNEYGLSLKRHANQQQEEMLLFYEVMTRFTKQL
ILSYPAISSTGQPLFASPYLSALIDLYEPGAIAVRQVGELNPLPRRDQAMSTRDIRILAI
DELKRNQPGLFLQILDEPGFQATARNILGAAEMAVARFEQEGFTEYEGVMVSAASRQAIC
ERFPQDYEFSTTQLELYLACPFQFFAQNVLGIEVPEPPELRTNFLQRGIHVHSILTRLYE
QLSAEGDNAQLYVADQIEPLFLELLEKRVSDSDVESKLQQVLLSIEKQILEDWGGLFAEQ
SETYGQLFEELWDSVPAIVGREVPFGKVPGEPDPSQRQYQHLTLGTGSRETRIRGQIDRI
DVGTVNGQKYFNIIDYKTGRSVPSSSEIRSGKKLQLALYLIAARRLEMIDADAEPFHLGY
WKIQESGFVMPLKSARKKLLEPISAEDLEILEVTLEGLVPHLAAFIRSGFFPVQVDEKIA
HLDQAFQSVCRVSQVESYRDRLGKQIDLLQFADSDPDSSAEQTQAT
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctgatgtccaaattttgacaggtatagccggttccggtaaaacggatcgtttg
ctggatgagtatcgacggacgctgcaggagggcctgaaacagcatgctcccgggaaaact
ctctggatttctcctaccgtccgttcacgtaaacaggtactggatcagttactcagtccg
gaaatgcctgtttgttttgctcctcatgtatttacctttgaggcctttgccgagaccata
ttacaatcgctggatcagcccgttcagaccctgcctgaaatctcaaaacgctacctgctg
aggagtatcgtagatgacctgatcgccgcaggccagattcaatacttcagctccatcgcg
ggaacgtcggggtttctggatttgatctcgcatttcatttctgaattgaaacgggaagaa
atctggccggaacagttttccgaggcatgtgcccgtttgaaaatggattcccgtcagaag
gatcaggaactggcattaatctatgatcgctatcaagtcgcgttacacgagatgcggcgt
tatgattctgagggacggttctggtctgcccggactgcgctgcaggaggggatgtggggc
ccgtttggtcaatttgatctgatcgtgctggatggttttgctgatttcacacatacgcag
tacgagattctggagctgttggcggccagaaccagcagactgttgatttcccttcccctg
gaaaatgaattacggcggcaggatttatttgctaaatctgtcgtcgccagacaggttctt
gaacgcagattgccgaaaacgatccaaatcgttgcctgcgagcgtaatgagcctgcgtct
tcccggtctcagatctgtgaagcgttatttgataatcctcgcgagatgaaaccttctaag
gctgcagaacatatcaaggttctggcagtcgccggtcagcggaatgaactggaagtactg
gcggtcgaagtcaagcagttactgctgcagggagtgcatccggaagagatttctctggta
tttcgttcgactctggaatacggtgacctgattcatgaaaccctgtccgcagccgggatt
ccctacttcctggggcaggaacaggagttttcccggtttcccgtgatccgggcgattttt
gccttcctgcagattgagctggataactggtccttcgacagtttgatgtccatcctggat
tcgaactacttttcacccgactggcctgaatttaagtcggggactgcagtgcgtagcctt
tcccggatattacgacaactgaagatcgactccggtaaaaccgatattttgaacgctctg
gaaaaggaatgccggaaagcagccgagctacatgcccgttatccggatcagccaaagcga
caagcgatactggaggaagtcgagtctgcctatcaactggcgaagcgactttccagtgaa
acgcaaaggttgagaggcaaggagctgtttgtcacctggattgatgtgctgacttcgctg
gcgaacgaatttggcttacccaaagcctggtcaaacgaggatgccagaacagaggctctt
gatcaacgtgatcaactggtatgggaacgttttcagaaacttctgtttcatgcggtctct
gaagtcgatcagattgagcagtttcatcagcgggaagctgctccacaggatttaattacg
tttcgtagtttactgctggatttgctggaacagcagactctcgcattacaaacagaagaa
gccggtcgtattcaggttctggatgcgtcccaactgagaaatctcagtgtcccctatcta
ctggtgggggggctcagtgaggccagttttccccgcagccatcgagaggattgtctttat
agcgaaaaagaccggggagaattgaatgagtatggactctcgctgaagcgccacgcgaat
caacagcaggaagaaatgctgttgttttatgaggtgatgacacgcttcacgaagcaactc
attctgagttacccggccatcagctctacggggcagccattatttgccagtccctacctg
tcggcattaattgatctgtatgaaccgggagcaattgcagttcggcaggtgggggaatta
aatccactgcctcgtcgcgatcaggcgatgtcgacacgtgatattcggattctggcgatt
gatgaattgaaacggaatcagccagggctgtttctgcaaattctggatgaaccgggattc
caggctacagctcggaatattctgggagcagcagaaatggcagtggcgcggtttgagcag
gaaggtttcaccgaatatgaaggcgtcatggtctccgctgcttctcgacaggcaatctgt
gagcgttttccgcaggattacgaattcagtaccacacaactggagttgtatctggcctgt
ccctttcaattttttgcgcagaatgtactggggattgaggttccagaacctcctgaattg
agaacgaattttctgcagcgggggatccacgtccacagtattctgacccgcttgtatgaa
cagctcagtgcagaaggcgataacgctcaactgtatgtcgcagatcagattgaacctctg
tttctcgaattactggaaaagcgagtttccgattcagatgtcgaatccaaattgcaacag
gtactactgtcgattgaaaaacagattctggaggattggggaggtctgtttgccgaacag
tcagaaacttatggccagttgtttgaagaactatgggattccgtgccggcgattgttggt
cgggaagttccgtttggaaaagtacccggagaaccagacccgtcacaaagacagtatcag
catctgactctgggtaccggttcacgtgagacacgtattcgaggacaaattgaccggatc
gacgtggggacagtcaatggtcagaaatatttcaatattatcgactacaagacagggcgt
agtgttccctcttcgtcagaaatacgatcaggtaagaaactgcagctggctttgtatctg
attgcggcccgtcgactggaaatgattgacgctgatgcggaacccttccatctgggatac
tggaagatacaggaatccggctttgtcatgcctttgaaatctgctcgaaagaaactgttg
gagcccatctcggctgaggatctggagattctggaagtgacactggaaggactggttccg
catctggcagcgttcattcgcagcggtttttttcccgtgcaggtggatgaaaaaatcgca
catctggatcaggcatttcaatcggtctgtcgcgtttctcaggtggaaagttaccgagac
agactggggaaacagattgatctgctgcagtttgcagattcagatccggattcttccgcc
gaacaaacacaagccacataa
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