Gimesia algae: Pan161_25630
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Entry
Pan161_25630 CDS
T09989
Symbol
gspD_2
Name
(GenBank) Putative type II secretion system protein D precursor
KO
K02280
pilus assembly protein CpaC
Organism
gax
Gimesia algae
Pathway
gax02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
gax00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Pan161_25630 (gspD_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gax02044
]
Pan161_25630 (gspD_2)
02035 Bacterial motility proteins [BR:
gax02035
]
Pan161_25630 (gspD_2)
Secretion system [BR:
gax02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
Pan161_25630 (gspD_2)
Bacterial motility proteins [BR:
gax02035
]
Pilus system
Pilus assembly proteins
Pan161_25630 (gspD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-ProteinID:
QDT90909
UniProt:
A0A517VD34
LinkDB
All DBs
Position
complement(3390365..3392596)
Genome browser
AA seq
743 aa
AA seq
DB search
MFKQNCHGSAFRIFETICFQNAIKIIAITIASLSSLAHLALAQGPAMLQMPPRALQQGGQ
YAAPPSQVQRQYAQPPVQVQHRVSPKYLPQTQYQSQTQYDPARQGVIPIQDAGSQTNGPQ
IQMVQDTGRITRKPLPTQIRSTPGIFDEMEIIIRRSQLIITNSRIRRYAIADPSIIEFVT
YSPTEISIVGLELGTTTLTLWFEGDDTPITYLVHTIQDPSLEGQRRIDYGKLERKIAVLF
PNSKVYLIPLSRKIIVKGEASDATEAANILSVIRGEVINYEGNLGGPQPYGAGAAYGGGY
GGGGGLLDGLGNNGYASSFIVNMLEIPGEFQVMIHVTIAQMNRTMMRQLGVDLSVLFDGG
RQFLGSSMGGVPSTLTGIFEAGEVNVLINALAQNGTTKIMARPTLTVLSGHSASFLAGGE
FAVPTIVGVGGAQGTSTTFRGFGTSIVVTPIVIDKDLIRMRIVPEYSQINDGNSVQGIPG
LNSRRAQTTVELREGQTIVLAGLFGHDSSTGVTRIPWLGEIPLVGSYLFSSKQSSQGESE
LLITVTPQLVRPMEEDEVPPYPGFEVTVPQDKELYKYAMTEGAPDTAVYQLQPYGRGAGQ
GVEVGYQPFNPAPASPYYPPAATGTYQQGPAAQPIPQPRSSFPTQPVHPRNPVHSNQHQP
LPPPPAPAASGPQAYAPGQYQGAQTPQRSGRFTQMIKNRFQNGPAENQNNSFIQPAGYVD
PKMRRASAEPQPAQSRFSLFGGE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagcagaactgccatggatcggcatttcgaatttttgaaacgatttgttttcaa
aatgccattaaaatcatcgcgattaccatcgcgagtctatcgtcgctcgctcaccttgca
cttgcacagggccccgcaatgctgcagatgccaccgcgtgccttgcaacaaggaggacaa
tacgccgcgccgccctctcaggtccaacgtcaatacgctcaaccaccagtacaagttcaa
catcgagtctccccgaaatatctgccacaaactcaataccaatcccagacacagtatgac
cctgcgcgccagggtgtgattcctattcaggatgcgggatctcagacgaacggtcctcaa
atccagatggtgcaggacacgggccgcattacccggaaacctctgccgactcagatccgg
tcgacccccggaatttttgatgagatggaaattatcatccgtcgcagtcagctgatcatc
actaattcacgtattcgccggtatgcgatcgcggatccttcgattattgaattcgtgacc
tattctcccacggaaatctcaattgtgggtctggaactgggaacgacgactttaacgctg
tggtttgaaggtgatgacacaccgattacctatctcgtgcatacgattcaggaccccagc
ctggaaggccagcgacggattgattacggaaagctggaacgaaaaatcgcggtactcttt
ccgaacagtaaagtatatctgattcctctctcgcggaaaatcattgtcaaaggcgaggcc
tctgatgcgacggaagcggcgaacattctgtcagtcatccgcggtgaagtgatcaactat
gaaggaaacctggggggacctcagccttatggagccggagccgcctatgggggcggttat
ggtggaggagggggcttgctggatgggttaggaaacaatggctacgcctcttcctttatc
gtcaacatgttagagatcccgggagaattccaggtgatgatccatgtgacgattgcgcaa
atgaaccgtaccatgatgagacagttgggtgtggatttgagtgtcctgtttgatggtggt
cgacagtttctgggatcttcaatggggggagttccctcaactttaacgggtatctttgaa
gccggcgaagtgaatgtattgatcaacgcattggcccagaatggtaccaccaaaattatg
gcacgcccgacattaacggtgttgagcggtcactcggccagctttctggccgggggggaa
tttgccgttccaacaattgtcggtgtcggtggtgcccaggggacctccacgacattccgc
ggctttggtacctctatcgttgtgactccgattgtgattgataaagatttgattcgtatg
cgaatcgtgccggaatacagccagattaatgacggcaattcagtgcagggaattcccgga
ttgaattcgcggcgggcacagacgaccgtcgaattacgtgaaggacagaccattgtcctg
gctggattatttgggcatgattcttcaaccggagtaacccggattccctggctgggagaa
attccgctggtggggagttacctgttcagctcaaaacagtcgagtcagggagagtcggaa
ttgctgatcacagtcactccccaactggtacgaccgatggaagaggatgaagtgcctccc
tatccaggttttgaagttacagtgcctcaggataaagaattatataaatatgcgatgaca
gaaggggctccggacacagccgtctatcaactgcagccttatggtcgcggtgctggccag
ggagttgaagttggctaccagccgttcaatccagctcctgcttctccttattatccaccg
gcggctaccgggacttaccagcagggacctgcagcacagccgattccacagccacgaagt
tccttcccgacgcaaccagtgcatccacgaaatccagtacactcgaatcaacatcaacca
ttgcctccgccaccagcacctgcggcgagtgggccacaggcttatgctcccggacaatat
cagggggcacagacaccacaacggtctggcagatttacacaaatgatcaaaaaccggttc
cagaatggtccagcggaaaaccagaacaattcctttatccagcctgcaggatacgtcgat
ccgaaaatgagacgtgcctcagcggaaccgcaacctgctcaatccagattttccctgttt
ggtggggagtaa
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