Gimesia algae: Pan161_30560
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Entry
Pan161_30560 CDS
T09989
Symbol
groL_1
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gax
Gimesia algae
Pathway
gax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pan161_30560 (groL_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gax03019
]
Pan161_30560 (groL_1)
03110 Chaperones and folding catalysts [BR:
gax03110
]
Pan161_30560 (groL_1)
03029 Mitochondrial biogenesis [BR:
gax03029
]
Pan161_30560 (groL_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gax04147
]
Pan161_30560 (groL_1)
Enzymes [BR:
gax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Pan161_30560 (groL_1)
Messenger RNA biogenesis [BR:
gax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Pan161_30560 (groL_1)
Chaperones and folding catalysts [BR:
gax03110
]
Heat shock proteins
HSP60 / Chaperonin
Pan161_30560 (groL_1)
Mitochondrial biogenesis [BR:
gax03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Pan161_30560 (groL_1)
Exosome [BR:
gax04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pan161_30560 (groL_1)
Exosomal proteins of other body fluids (saliva and urine)
Pan161_30560 (groL_1)
Exosomal proteins of breast cancer cells
Pan161_30560 (groL_1)
Exosomal proteins of colorectal cancer cells
Pan161_30560 (groL_1)
Exosomal proteins of bladder cancer cells
Pan161_30560 (groL_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QDT91399
UniProt:
A0A517VEI7
LinkDB
All DBs
Position
complement(4000693..4002294)
Genome browser
AA seq
533 aa
AA seq
DB search
MAKMIAFDQEAQEAMRRGISKLARAVRVTLGPKGRNVILEKSFGSPTVTKDGVSVAREIE
LPDKFEDMGARMVREVASKTSDIAGDGTTTATIMAEAIYNEGLKSVVAGVSPIAMKRGMD
KAVEDIVDKLHKMSIECKNKKAISQVGKVASNGDEEIGKILADAMEQVGKDGVITVEEGQ
SLQTSFEVVEGMQFDRGYLSPYFVTDPQSMSCDLEDAYVLVHEKKISNIKDLVPVLEKVV
NAGKPLLIIAEDIEGEALSTLVINKLRGTFRCCAVKAPGYGDRRKAMLQDIAIMVGGQAI
FEDLGIQLENLQLSDLGTAKKVSVDKDNATIIEGGGKPGEIKSRIEQIRRELENSSSDYD
KEKLEERIAKLSGGVAQINVGAATESEMKEKKARVEDALHAVRAAVAEGILPGGGVALLR
CSAACKPSGLSQEEKVGYEIILRACRAPLTSIANNAGDDGSVVCEKVSELEGNMGYNAAT
SKYEDLVKTGIIDPTRVTRSALQNSASVSTLLLTSDALIAEKGKDDHGDDDLH
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatgattgccttcgatcaggaagctcaagaagcgatgcgacgcggcatcagt
aagctggcgcgcgcagttcgagtaacgctgggtcccaagggacgtaatgttattcttgaa
aaaagctttggatccccgactgtgactaaagacggtgtatctgttgcccgtgaaatcgaa
ctcccagacaagttcgaagacatgggtgcccgcatggttcgcgaagttgccagcaaaacg
tctgacattgccggcgatggaaccacaactgcgactattatggcagaggcgatttacaat
gaaggtctgaaatccgttgttgccggtgtcagcccgattgccatgaaacggggcatggat
aaggcagtcgaagacattgtcgataagctccacaaaatgtcgatcgaatgcaagaacaaa
aaagcgatttcgcaggttggtaaagttgcctcgaatggcgatgaagaaatcggaaaaatt
ctggcagatgccatggagcaggttggaaaagacggtgtgattaccgttgaagaaggtcag
agtctgcagaccagcttcgaagtggtcgaaggcatgcagtttgaccgcggttatctgtct
ccttacttcgtaaccgatcctcagagcatgtcctgcgatctggaagatgcctacgttctg
gttcacgaaaagaagatttcgaacattaaagatctggttcctgttctggaaaaagtcgtt
aatgccggtaagcctctgttgattatcgctgaagacatcgaaggtgaagcgctgtcgacg
ctcgtaatcaacaaactgcgtggtaccttccgctgctgtgctgttaaagcacctggttac
ggcgatcgtcgtaaagcaatgctgcaggatatcgccatcatggtcggtggtcaggcgatc
tttgaagacctcggaattcagctggaaaatctgcagttgtccgatttgggaacagccaag
aaggtttccgtcgacaaagacaacgcgaccatcatcgaaggtggtggaaagcctggcgaa
atcaaatcccggatcgaacagattcgtcgtgaactggaaaattcatccagtgattacgac
aaggaaaagctggaagaacggattgcgaaactttccggtggtgttgcacagatcaatgtt
ggtgctgctaccgaaagcgaaatgaaagaaaagaaagctcgcgtggaagacgcattgcat
gctgttcgtgctgctgtcgctgaaggcattctgcccggtggtggcgttgcgttactgcga
tgctctgcagcctgtaagccatcgggtctttcacaggaagaaaaagtgggttacgaaatt
attttgcgggcctgccgtgcaccgctgacatccattgccaataacgccggtgatgatggt
agtgtggtctgtgaaaaggtttccgaactggaaggcaatatgggctacaacgccgcgact
tccaagtacgaagatctggtcaaaaccgggatcattgatccgacccgtgtgacgcgttcc
gctctgcagaattcagccagtgtttcgactctgctgctgaccagcgatgctctgattgct
gaaaagggtaaggacgaccatggagacgacgatctgcactaa
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