Gimesia algae: Pan161_40550
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Entry
Pan161_40550 CDS
T09989
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gax
Gimesia algae
Pathway
gax03030
DNA replication
gax03410
Base excision repair
gax03420
Nucleotide excision repair
gax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pan161_40550 (polA)
03410 Base excision repair
Pan161_40550 (polA)
03420 Nucleotide excision repair
Pan161_40550 (polA)
03440 Homologous recombination
Pan161_40550 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gax03032
]
Pan161_40550 (polA)
03400 DNA repair and recombination proteins [BR:
gax03400
]
Pan161_40550 (polA)
Enzymes [BR:
gax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pan161_40550 (polA)
DNA replication proteins [BR:
gax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Pan161_40550 (polA)
DNA repair and recombination proteins [BR:
gax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Pan161_40550 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pan161_40550 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
TraI_hel_assoc_N
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QDT92388
UniProt:
A0A517VHA1
LinkDB
All DBs
Position
5272732..5275434
Genome browser
AA seq
900 aa
AA seq
DB search
MKETLYIIDTFSLVFQVFHAVPAMTGPTGQPTNAIFGITRDILNIIKTHAPDYLIFAMDS
SGPGTRKDLYPEYKANRSAMPEDLVPQIPHIMDVVRGFQVPVIECPGWEADDVFATIARL
ANEKGIETTIVTNDKDARQLINDAIRLYNIRKNQFMDSEAVQTDWGVRPDQVIDFQSLVG
DSVDNIPGVPLVGPKKAQTLIEQFGTLEGVLANADKAKGPKLQQNLKEFADQARMSRELV
TLNQSLDLNIDWEASRLTHPDRERLHQLFVDFGFRRFAEEMKKELSTGAPSEPVERVRET
IDSKSAFETFLALLKEQDEFCVDLETTGLKPAEAEIVGWAISWEKHRGFYIPVEGPTGQS
SLDPQYVLEHLKPILEDPEILITNQNIKYDMVVLMRVGVFLQGVSIDPMVASYLISAGER
GHSLDKLSERYLQHTMIPISDLIGSGKQQKKMFEVDVDKVAEYAVEDAEIAWQLSRILQE
ELKHAGLWDLYWDLERPLISILAEMEFTGIKVDTTELKQQSQLLEKRLMTLIGEIHEMAG
HEFNIASPLQLRTVLFEELNLPVFKKTKTGPSTDQSVLEKLAPLHALPAKITEHRHLSKL
KSTYLDALPDLVNPETGRIHASFNQVVAATGRLSSSDPNLQNIPVRTEEGRQIRKAFIPQ
DESWRLLCADYSQIELRVLAHLSQDVALSQAFREGADIHTAVASDIYSVPHDQVDSNMRR
TAKAVNFGVIYGQSPFGLSEAIGIPQSEAAGFIEDYFARYQGVREFLDQILEDCAKQNYV
TTICGRKREIQGVRGGVQKQLNMPERTAINTVIQGSAADLIKQAMLNVSDRIKQEQHPGR
MLMQIHDELVFEVPLTALDTLGLIVREEMESAMNLEVPLIVDMSSGLNWLEQNPLEIAHS
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaacactttacatcattgatacgttttctctggtatttcaggtttttcatgct
gtgccggctatgaccggccccacgggacaacccaccaatgccatattcggcatcacccgt
gatatcctgaacattattaaaacgcacgctcctgattatttaatctttgccatggactcc
agcggtccgggtacacgaaaagatctctaccctgaatataaggccaatcgctccgcgatg
cccgaagatctggttccgcaaatcccccacatcatggacgtcgtcagagggtttcaggtc
cccgtcatcgaatgccccggctgggaagcagacgacgtatttgccaccattgcccgtctg
gcgaatgaaaaagggatcgaaaccaccatcgtcaccaatgacaaagatgccagacaactc
atcaatgatgccatccgactctacaatattcgcaaaaatcagttcatggactctgaagca
gtccagacagactggggcgttcgacctgatcaggtgattgattttcaatccctggtcggt
gacagcgtggataatattcccggggttccactggtgggacctaaaaaggcacagactctg
atcgaacagtttggaaccctggaaggtgttctggccaatgcagacaaagcgaaagggcca
aaactgcagcaaaacctgaaagaattcgccgatcaggcccgcatgtcgagagaactggtt
accttgaatcagtcactggacctcaacatcgactgggaagcatcccgattaactcatccg
gaccgcgaacgtttacatcagttgttcgtcgattttggatttcgtcgctttgctgaagag
atgaagaaggaactctcgaccggagccccctcagaacctgtcgagcgggtccgcgaaacc
attgacagcaaatcggcgtttgaaacattcctggccctgcttaaagaacaggacgaattc
tgtgtcgacctggaaacaacgggattgaagcctgcagaagcggaaattgtaggctgggcc
atcagctgggaaaaacaccgcggattttatattccagtcgaaggccctacaggccagtca
tccctggatcctcaatatgtcctggaacatctgaaaccaattctggaagaccccgagatc
ctgatcaccaatcagaatatcaaatatgacatggtcgtactgatgcgggtaggcgtgttt
ctgcagggagtcagcatcgaccccatggtggccagctatctgatcagcgccggcgagcgc
ggacacagtctcgacaaactgtcagagcggtatctgcagcataccatgattcccatctcc
gatctgatcggctccggcaaacagcagaagaagatgtttgaagtcgacgtcgataaagtc
gccgaatacgccgtcgaagatgctgaaatagcctggcagctctcgcggatcctgcaggaa
gagctcaaacatgccgggttatgggacctctactgggatctggaacgaccgctcatttcc
atactggccgagatggaattcacaggaattaaagtcgacaccacagaactcaagcagcag
agtcaactgcttgagaaacggttaatgacgctgatcggcgaaatccacgaaatggcaggc
catgaatttaacattgcctccccactgcaactccgaacggtgttattcgaggaactgaac
ttgcccgtctttaaaaaaacaaaaacgggccccagcacggatcagagtgtactggagaag
ctggcaccgctgcatgccctgcccgccaagatcacagaacatcgacatctctccaaacta
aagagcacctacctggatgcgctgcccgatcttgttaatccagaaacaggtcgaatccat
gccagctttaatcaggtcgttgccgccacaggccgactgagctcgagtgatcccaatctg
cagaacataccggtacgaacagaagaaggacggcagattcgcaaagcattcattccccag
gatgagagctggaggctgctctgtgccgattattcacagatcgaactccgggtgctggca
cacctgagtcaagatgtcgcactaagccaggcgttccgcgaaggggctgacattcacaca
gccgtcgcctccgatatctattctgtccctcatgatcaggtcgacagcaacatgcgtcgc
actgcgaaagcggtcaacttcggtgtgatctacggtcagagcccgtttggtttatcagaa
gccatcggtatccctcaatcggaagccgctggattcatcgaagactattttgcaagatat
cagggggtcagagaatttctggatcagatcctcgaagattgtgcaaaacaaaattatgtc
acaacaatctgtggcagaaaacgtgaaattcagggagtccggggaggtgtgcaaaaacag
ctcaacatgcccgagagaaccgcgatcaataccgtcattcaggggtctgcagccgacctg
attaaacaagcgatgctgaatgtcagtgatcgaataaaacaggaacagcacccggggcgc
atgctcatgcaaatccacgatgaactggtgttcgaagtgccgctcaccgcgctggacact
ctgggcctgatcgtacgggaagagatggaatccgccatgaatctcgaagttcccctgatt
gtggatatgtcgagcggactcaactggctggaacagaacccgctggaaattgctcactcg
taa
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