Gimesia algae: Pan161_56750
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Entry
Pan161_56750 CDS
T09989
Symbol
rpoA_2
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gax
Gimesia algae
Pathway
gax03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gax00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pan161_56750 (rpoA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gax03021
]
Pan161_56750 (rpoA_2)
03400 DNA repair and recombination proteins [BR:
gax03400
]
Pan161_56750 (rpoA_2)
Enzymes [BR:
gax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pan161_56750 (rpoA_2)
Transcription machinery [BR:
gax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Pan161_56750 (rpoA_2)
DNA repair and recombination proteins [BR:
gax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Pan161_56750 (rpoA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QDT93988
UniProt:
A0A517VLU2
LinkDB
All DBs
Position
complement(7294197..7295213)
Genome browser
AA seq
338 aa
AA seq
DB search
MRIRWRGLELPSRVIPDRDSMTSTYGMFVAEPFERGFGATIANSLRRILLSSLEGSSVTR
VKIQGVQHEFTTIPGVVEDITEICLNLKSLIVKNSSSTSKTLRIERHERGVVTGADVITD
DQVEVINKDLVIATMTDDVPLNMELTIENGRGYSPASEHAQHETEVGVIPLDATFSPVVR
VRYKIEDTRVGQRTNYDKLILEIWTNGTVKPDMALVEASKILRKHLNPFITYREPGPEMP
PEGGLKGMLDTTGYAPIDLELEEKLNQSLAELNLSVRATNCLESEGINTVRDLVGKSEDH
LLHVRNFGETTLVEVRERLNQIGLRLGMKIPSSSSQSR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatccgttggcgaggactggaattaccaagccgtgtcatccctgatcgggactca
atgacatcaacttatggtatgtttgtagccgaaccattcgaacgtggattcggtgcaacc
attgccaacagtctgcgacgaatcctgctttccagcctggaaggcagctcggtaacccgc
gtgaaaatccagggtgtgcagcacgaatttacaacgatccccggtgtcgtagaagacatc
accgagatctgtctgaatctgaagtcgctgatcgtcaagaattccagctcgacctccaag
actctgcgaatcgaaaggcatgagcggggcgttgtgacgggcgctgatgtcattaccgac
gatcaggttgaagtcatcaacaaagatctggtgattgccaccatgactgatgatgttccc
ctcaacatggaactgaccatcgaaaacggccgcggatattctcctgcttcagaacatgct
cagcatgaaacagaagtcggcgtgattcctctggatgccacattctcacctgtcgtgcgt
gtgcgttataaaattgaagatacccgtgttggtcagcgtaccaactacgacaaactgatc
ctggaaatctggaccaacggaactgtcaagcctgatatggctctggtagaagcctccaag
attctccgtaagcacctcaacccctttattacttaccgcgagcccggcccggaaatgccg
cccgaaggtggtctcaagggaatgctggatacgaccggttacgcgccaatcgacctggaa
ctggaagaaaaactcaaccagagcctggccgagctgaacctgtccgtacgtgcgaccaac
tgtctggaatcggaagggatcaacactgtccgcgacctggttggaaaatcagaagatcat
ttattacatgttcgtaactttggggaaaccaccctggttgaagttcgtgaaagactgaac
cagattggcctgcgtctgggaatgaagatccccagctcttcctcacaatcgcgttaa
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