Gimesia algae: Pan161_58200
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Entry
Pan161_58200 CDS
T09989
Symbol
pcrA_3
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gax
Gimesia algae
Pathway
gax03420
Nucleotide excision repair
gax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pan161_58200 (pcrA_3)
03430 Mismatch repair
Pan161_58200 (pcrA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gax03400
]
Pan161_58200 (pcrA_3)
Enzymes [BR:
gax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pan161_58200 (pcrA_3)
DNA repair and recombination proteins [BR:
gax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pan161_58200 (pcrA_3)
MMR (mismatch excision repair)
Other MMR factors
Pan161_58200 (pcrA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
Helicase_RecD
AAA_11
AAA_22
HHH_5
NPHP3_N
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QDT94127
UniProt:
A0A517VM79
LinkDB
All DBs
Position
7457371..7459452
Genome browser
AA seq
693 aa
AA seq
DB search
MSEIPPQLEDLFKQLNPEQQAAACHDSGPLLIIAGAGTGKTTTLSHRVAYLISQGIDPSR
ILLLTFSRRAANEMVRRVDALLRAMGAGRENSASARSRSIWGGTFHSTAARLLRRYGQAI
GLPDDFTIIDRSDAEDLMSALRSELDLGNNGKKFPRKGTLLEIYSRCVNTCSKLDPILER
HYPWCLEHTDELKKLFQAFVDRKEKQNILDYDDLLLFWHALAADPAGGKLLRGQFEAVLV
DEYQDTNILQSGILKNLCPDGKGLTVVGDDAQSIYSFRAATVRNILDFPQEYEGTTLVTL
EENYRSTQPILQATNQIIDEAHERHEKNLWSSKISGEAPCLVDCSDNNEQADFVVQQVLE
HREAGIPLNQQAVLFRASHHSLSLEVELARRNIAYHKYGGLKFIETAHVKDLMAYLRLAE
NPRDAVSGLRVLTLLPGIGQKKAQQLINLLAESQFRFDAWSEFKPPAATVEHWPLFVRLM
KNLSSPQSEKRGISAEVHQVRTFYSPLLDQQYDNATSRQRDLEQLEQVASRFSSRMSFLE
EITLDPPSSTQDVSAASGADDDDFLVLSTIHSSKGLEWDAVYVLQAADGSIPSEMSLESE
DEIDEERRLFYVALTRAKNWLYVCFPHRQYFQNRRWNQAHSYAQLTRFVSPKTIPLFQRR
PAFSADALDTPQEAEIETTAEDIRKNIRNMWSA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaatccccccacaactggaagaccttttcaaacagcttaatccggagcagcag
gcggcggcctgtcacgattcgggtcccctgttgattatcgccggtgcggggacgggcaaa
acaaccacgctttcgcatcgagtcgcatacctgatttcccaaggcatcgaccccagccga
attctgctgctcaccttttcccgtcgcgccgcgaatgagatggtgcggcgcgtcgatgcg
ctgctgcgtgcaatgggcgcgggtcgcgagaattccgcctctgcccgttcgcggagcatc
tggggaggaacgtttcactcaacggcggcacgactgctgcgacgttacggtcaggccatt
ggtctgcccgatgatttcacgatcattgaccgcagtgatgccgaagatttaatgagcgcc
ctccgcagcgaactcgacctgggcaataacggcaaaaagtttccccgcaaagggacacta
ttggaaatttacagtcgctgtgtgaatacctgctccaaactggacccaattctcgaacgg
cattatccctggtgtctggaacataccgatgaattgaagaagctgtttcaggcgtttgta
gaccgcaaagagaaacagaatatcctcgactacgacgacctgctgctgttctggcatgcg
ctcgccgctgatcccgcgggaggcaaactgctgcgaggccagttcgaagccgtgctcgtg
gacgaatatcaggacacgaacattctgcagtcgggcattctgaaaaacctctgtccggac
ggtaagggactgacggtcgtcggcgacgatgcacagtcgatctattccttccgggccgcg
accgtgcggaacattctggatttcccgcaggaatacgagggaacaacgctcgtcacgctg
gaagaaaactatcgcagcacacaacccatcctgcaggcgacgaatcagattattgacgaa
gcccacgaacgccacgagaaaaacctgtggtcgtccaaaatcagcggcgaagcgccctgt
ctggtcgactgcagtgacaacaacgaacaggccgacttcgtcgtgcagcaggtactcgaa
caccgggaagccgggattcccctgaatcaacaggcggtgctgttccgggcttcacaccac
agtctttcgctggaagtggaactggcgcgtcggaatatcgcctatcacaaatatggcggc
ttgaagtttattgaaacggcacacgtcaaagacctgatggcgtatctgcgactggcggaa
aatccccgcgatgcggtctcggggctacgagtactgacgttactgccgggcattggccag
aaaaaggcacaacagttgatcaatctgctggcggaatctcagttccgctttgatgcctgg
tcggaattcaaaccgccggcggcgaccgttgagcattggcctctgttcgtgcgactaatg
aaaaacctgagttccccgcaatcagaaaagcggggcatctcggcagaagtccatcaggtg
cgcacgttttatagccccctgctcgaccagcagtacgacaacgccacatcgcgtcagcgg
gatctggaacagctggaacaggttgccagccgcttcagcagccgcatgagcttcctggaa
gagattacccttgacccacccagttccacgcaggatgtctcagcagccagcggcgcggat
gacgatgatttcctggtattgagtacaattcactcatccaaaggtctggagtgggatgcg
gtctatgtgctgcaggccgccgacggcagtattccgtcagagatgtcgctggaaagcgaa
gacgaaatcgatgaagaacgacgcctgttttatgtcgcgttgacacgggcgaaaaactgg
ctgtatgtctgttttccccaccgacagtatttccagaaccgccgctggaaccaggcacac
agttatgcccagttgacgcggtttgtttctccaaagacgatccctctgttccagcgacgc
ccggcgttcagcgccgatgctttggatacgcctcaggaagcggaaatcgaaacgacggcg
gaagacattcgcaagaatatccgcaacatgtggtccgcctga
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