Gimesia alba: Pan241w_00060
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Entry
Pan241w_00060 CDS
T09945
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
gaz
Gimesia alba
Brite
KEGG Orthology (KO) [BR:
gaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gaz03016
]
Pan241w_00060 (truD)
Enzymes [BR:
gaz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Pan241w_00060 (truD)
Transfer RNA biogenesis [BR:
gaz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pan241w_00060 (truD)
Prokaryotic type
Pan241w_00060 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Anamorsin_N
Motif
Other DBs
NCBI-ProteinID:
QDT39953
UniProt:
A0A517R7Z7
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All DBs
Position
complement(6211..7281)
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AA seq
356 aa
AA seq
DB search
MPDPEQSFLPYLTEDLPGIGGVLKTTMEDFVVEEIPVYAPSGEGDHLFLWVEKRDVSAQF
LVKILSQLLRLNPRDIGVAGLKDRRAVTRQFVSVPADCEPLLADFSFDGIKILESTRHER
KLKTGHLRGNRFSILIRDSAEDAFQKATSIQQKIEQVGFPNYYGTQRMGRDNETLVMGLK
LLKDERVPSKYFRNKSLKRLALSAAQSSLFNRVLSERVSNQSLHTVQLGDVMQVCETGGI
FVVEDVAREQERFDNRETVITGPIFGPKMKSPTDTVLEQEQHVLSEFELEMSHFSRFKKL
TPGARRPFLIWPDQLRIEETGEGVLFHFTLPSGVYATMLLREFMKNESAAQTADDV
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcccgaacaatcatttctgccttacctgactgaagatttaccgggaatcggc
ggcgttttaaaaacgacgatggaagatttcgtcgtagaagaaattcccgtgtatgctccc
tcgggggaaggagatcatcttttcctctgggtggagaagcgggatgtctcggcgcagttt
ctggttaaaatcctgtctcaactgctgcgactcaatccccgtgatatcggggtcgccggg
ttgaaggatcggcgggcggtaacacgacagttcgtttcggtaccagcggattgtgaaccc
ttgttagccgatttttctttcgacggcatcaagattctggaaagcacgcggcacgaacgg
aaactgaaaaccggacatctcagaggcaatcgattttcgattttgatccgagattcggca
gaggatgcgtttcagaaagcaacgtcgatccagcagaaaattgagcaggtaggttttccc
aattattacggtacacaacggatgggccgggataatgaaacgcttgtgatgggtctgaag
ctgctcaaagacgagcgggttccgagcaagtatttccgcaataaatcgctcaaacgcctg
gcattatcggcggcacaatcgagtctgttcaatcgtgtcctctcggaacgggtttcgaat
cagagcttgcataccgttcaactgggagatgtgatgcaggtctgtgaaacaggcggcatt
tttgtggtggaagatgtagcacgcgaacaagagcggtttgacaatcgagaaacggtcatc
accggaccgatctttggaccgaaaatgaagtcgcctacggatacagtgctggaacaggag
cagcatgttctgagtgaatttgagctggagatgtctcatttttctcgcttcaaaaaactg
actccaggtgcccgacgcccttttcttatctggcccgatcaacttagaatagaagagacg
ggtgagggggttttatttcatttcactttgccttctggcgtgtatgcgacaatgctgctc
agagaatttatgaaaaacgaatcggccgctcaaacagccgacgacgtttaa
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