Gimesia alba: Pan241w_01130
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Entry
Pan241w_01130 CDS
T09945
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gaz
Gimesia alba
Pathway
gaz03420
Nucleotide excision repair
gaz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pan241w_01130 (pcrA_1)
03430 Mismatch repair
Pan241w_01130 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaz03400
]
Pan241w_01130 (pcrA_1)
Enzymes [BR:
gaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pan241w_01130 (pcrA_1)
DNA repair and recombination proteins [BR:
gaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pan241w_01130 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
Pan241w_01130 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
PcrA_UvrD_tudor
AAA_12
ResIII
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QDT40060
UniProt:
A0A517R848
LinkDB
All DBs
Position
complement(129234..131498)
Genome browser
AA seq
754 aa
AA seq
DB search
MDFQQVLTPPQYAAVSHHQGPLLVLAGPGSGKTRVITHRIASLIHAGIPQHQILGITFTN
KASDEMGERVRQLIPDSRVEISTFHKFCVRILRRYGNTVGLDSNFSIFDTTDQHQLIRYV
LNELDIDTVAYNPSTIASMISRAKNDLITAERFVEAFQESIGDHLQAVAARVYPVYQKLL
LESNAVDFDDLLLHVASLLKGSPELRATLDERYQYILVDEYQDTNLAQYQIVMGLSLNTR
NLCVTGDPDQSIYGWRGAKIENILQFERDFPDCKTIRLEQNFRSTKAILRVADDLISHNQ
RRKPKTLFTENQEGCPVELLCFSDERQEANEIALHIRNAVDRGDYDFNDFAVFYRVNSLS
RELELALARHKIPYQLAGSVAFYERTEVKDLLSYLKLINNPDDRVAFSRIVNKPLRGIGK
ATQNKLIRWAEERGTSLLEAAHQAKDCPALSKRASNMVARFAKMISGFSMADSGSVGHLM
EAVIDSTRLIDSWKESPDEEDQQRISNVNELLSTARKYDEIFGEETNLEGFLEASTLASA
TDQLDSNAGRVTLMTLHAAKGLEYPVVFIVGVEQNLIPHERVLREEFRDGLEEERRLFFV
GITRAEQCLYLTQTRERSLRGRPWRTITSDFLKEIDVDVKDQTDNMFETKSHFDEFVESI
KRGEVDTEALKAATPKRPLLMTGADLLKQTPEAADIPQGFSVGMRVRHPRYGVGTVMGIS
GYARKRTLDVLFDDADESQTFIAAHCPLQPLGLR
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
ttggattttcagcaggtcctgacgcctccgcagtatgcggcggtctcacatcatcaaggc
cccttactggtcctggctggtcccggctccggcaaaacacgtgtgattacccaccggatt
gcctcgctgattcacgcagggattcctcaacatcaaatcttaggaattaccttcaccaac
aaagcttcggacgaaatgggcgagcgggtccgccagttgatcccagattcacgcgtggaa
atttcgacctttcacaaattctgtgtgcggattctgagacgctacggaaacaccgtcggc
ctggatagcaacttctcgatttttgacacgacggaccagcatcagttgattcgctacgtt
ctgaatgaattggatatcgataccgtcgcctataatccgtcaaccatcgcctccatgatc
agccgtgccaagaatgacctgatcacagcagaacgatttgtcgaagcgtttcaggaatcg
ataggcgatcatctgcaggcagtcgcggcacgcgtctatccggtttatcagaagctgtta
ctcgaatcgaatgccgtcgactttgacgatctgttattacacgtcgccagcctcctgaaa
gggtcacctgaactccgggcaacgctggatgaacgctatcaatatattctcgttgatgaa
tatcaggatacgaatctggcacagtatcaaattgtaatgggactttccttgaacacgcgt
aatctgtgcgtgaccggcgaccccgatcagtcgatctatggctggcgtggtgcaaaaata
gaaaacatcctgcagtttgaacgcgattttccggactgcaaaaccattcgcctggaacaa
aactttcgcagcacgaaagccatcttgagagtcgccgacgatctgatttcacataaccag
agacgcaaaccgaaaacgctgtttaccgaaaatcaagaaggttgtcccgttgaactgctc
tgcttcagtgacgaacggcaggaagccaacgagattgccctccatattcgaaacgccgtc
gatcgaggcgattatgattttaatgacttcgccgttttctaccgtgtgaattcgctttcc
cgagaactggaactggctctggcacgccataaaatcccgtatcaactggccggcagtgtg
gccttttatgagcggaccgaagtcaaagacctgctgtcctatctgaaattgatcaacaat
cctgacgaccgcgtcgcgttttcccggattgtgaataaaccactgcggggaatcggcaaa
gccacccaaaacaagctgattcgctgggccgaagaacgcggcaccagcttgctggaagcc
gcccatcaggcgaaggactgccccgcgctttctaaacgtgcctcaaatatggtcgcccgg
tttgcaaaaatgatctctggtttttccatggccgactccggttcggtggggcatttaatg
gaagccgtcatcgatagtacgcgcctgatcgacagctggaaagaaagccctgacgaagag
gatcagcaacgcatctccaacgtgaatgaattactctcaaccgctcggaaatatgatgaa
attttcggcgaagaaacgaatctggaaggcttcctggaagccagtactctggcgagtgcc
accgaccagttagactcgaatgccggccgcgtcacattaatgaccttgcacgcggctaaa
ggtctggaatacccggtcgtctttatcgtgggagtggaacaaaatctaattccgcacgaa
cgcgttttgcgtgaagaatttcgcgatggcctggaagaagagcggcggctgtttttcgtg
ggcatcacgcgggccgaacaatgtttatatttaacacagacgcgcgagcgttctctcaga
ggccgtccctggcgaaccattactagcgattttttgaaagagatcgacgtcgatgtcaaa
gaccagacagacaacatgttcgaaacgaaatcgcacttcgatgaatttgtcgagtccatc
aaacgcggcgaagtcgataccgaagccttaaaagcagcaacacccaaacgcccgctgttg
atgacgggggccgacctgttgaaacagacgccggaggccgccgacatcccacaagggttt
tctgtgggaatgcgcgtcaggcatccgcgttatggtgtagggactgttatgggtatcagc
ggctatgcccgcaagcgaacgctcgacgtcctgtttgatgatgccgacgaaagccagacc
ttcatcgccgctcactgtcccctacaaccgttgggactgcgctaa
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