Gimesia alba: Pan241w_06480
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Entry
Pan241w_06480 CDS
T09945
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
gaz
Gimesia alba
Pathway
gaz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pan241w_06480 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaz03400
]
Pan241w_06480 (alkA)
Enzymes [BR:
gaz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Pan241w_06480 (alkA)
DNA repair and recombination proteins [BR:
gaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pan241w_06480 (alkA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Ribosomal_S10
Rootletin
UPF0758_N
Motif
Other DBs
NCBI-ProteinID:
QDT40591
UniProt:
A0A517R9Q4
LinkDB
All DBs
Position
complement(809551..810186)
Genome browser
AA seq
211 aa
AA seq
DB search
MNDHAATFRKASQHLRKADPRLKTVIDTVGPCPLKPYRYRFALLLRSIVSQQISTSAART
IYKRLHALTGKGQPTAEKIMRLSHEQLRSVGLSTQKANYVHHLAEMVLENNVRLHQMHRM
TDEEVTAELIQVKGIGQWTAQMFLMFGLCRPDVFPHDDLGIQNGIQQIYQLKSRPDKQTC
IEIAERWQPYRTVASWYCWRTLEMETPDGPW
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaccacgcagccacattccgcaaagcgtcacagcatctgagaaaagcagatccg
cgtctgaaaaccgtcatcgataccgtcggtccctgcccgctcaaaccataccgctatcgc
tttgctctcctgctgcgttcgattgtctcacaacagatttctacctcggcggcccgcacg
atttacaaacgtctgcatgcactcacgggaaaaggccaacccacggcagaaaaaatcatg
cgactctcgcacgaacaactccgctcagtgggtctctctacccagaaagccaattacgtg
catcacctggcagagatggttctggaaaacaatgtccgcctgcatcagatgcaccgcatg
accgatgaagaagtcactgcagaactgattcaggtcaaaggcatcggccagtggaccgcg
caaatgtttctgatgttcggcctctgtcgacccgatgtcttccctcacgatgatctggga
attcaaaacggcattcagcagatctatcaactcaaatcccgccccgacaaacagacctgc
atcgaaattgcagagcgttggcaaccctatcgtaccgtcgccagctggtactgctggcgg
accctcgaaatggagactcccgacggtccctggtaa
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