Gimesia alba: Pan241w_13730
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Entry
Pan241w_13730 CDS
T09945
Symbol
yhaM_1
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
gaz
Gimesia alba
Brite
KEGG Orthology (KO) [BR:
gaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaz03019
]
Pan241w_13730 (yhaM_1)
Messenger RNA biogenesis [BR:
gaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pan241w_13730 (yhaM_1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Matrilin_ccoil
Cas3_HD
HD-CE
Motif
Other DBs
NCBI-ProteinID:
QDT41313
UniProt:
A0A517RBU0
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All DBs
Position
1679596..1680567
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AA seq
323 aa
AA seq
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MSRQYINQLKDGDTVNEVFLLVDKQLRANRNASLFLSADLRDCTGVVNARMWNVVEERMQ
HFQSGNYVQAKGKVHLFQGTLQIILTYIEPVSAENLDPAEFQPQAPQDVQQLLSKLREML
LSIENNEIRTLMECFLVDEGLMDEFCRAPAGVKTHHAYHGGLIEHVVNLMETAQRVADLY
PKADMSLLLAGVFLHDLGKVRELGYENEFVYTDEGQLLGHLIIGVEMLTEKINAYQEMTG
ESFPKEAELRLKHMIVSHHGTYEFGSARLPMTPEAVALHHLDNLDAKVNEFARFIDDDLN
STSNWTPYSPRLQRKLFKGITED
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcaatatataaatcagttgaaagatggtgatacggtcaatgaggtttttctg
ttggttgataagcagttacgtgccaaccggaatgccagcctgtttttatcagccgatttg
cgagattgtaccggtgtcgtgaatgcccggatgtggaatgtcgttgaagaacggatgcag
cattttcaatcgggaaattacgtccaggccaaaggcaaggtgcatctgtttcagggaacc
ttgcaaattattctgacttatatcgagcccgtttccgcggaaaatcttgatcccgccgag
tttcaaccacaggcaccacaggatgtgcagcagctgctgagcaaactccgcgagatgctg
ttgagcatcgaaaacaatgagattcgcacgttaatggagtgctttctggttgatgaaggg
ctgatggatgaattctgcagagcaccggcgggcgtcaaaactcatcatgcctatcatggc
gggctgatcgagcatgtcgtcaatttaatggagacagcccagcgtgtggcggatttgtat
cccaaagccgacatgagtctcttgctggcgggtgtctttttgcatgatcttggcaaagtg
cgggagctcggttacgagaacgaattcgtctacacggatgaaggtcaattattaggacac
ctgattatcggtgtggagatgctgaccgagaaaatcaacgcttatcaggaaatgacgggc
gaatcgtttccgaaagaggcagaactgcggctgaaacatatgattgtcagtcatcatggg
acgtatgaatttggtagtgcccgcttacccatgactcccgaagcggttgccttgcatcat
ctcgataacctggatgccaaggtcaatgagtttgcgcgattcattgacgacgacttgaac
tccacatcgaactggaccccctattcgccccgcttgcagcgaaaactatttaagggaata
accgaggactga
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