Gimesia alba: Pan241w_14990
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Entry
Pan241w_14990 CDS
T09945
Symbol
rhlE_1
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
gaz
Gimesia alba
Pathway
gaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pan241w_14990 (rhlE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaz03019
]
Pan241w_14990 (rhlE_1)
Enzymes [BR:
gaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Pan241w_14990 (rhlE_1)
Messenger RNA biogenesis [BR:
gaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Pan241w_14990 (rhlE_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
HEM4
ERCC3_RAD25_C
Utp25_C
Mononeg_RNA_pol
Motif
Other DBs
NCBI-ProteinID:
QDT41438
UniProt:
A0A517RC23
LinkDB
All DBs
Position
complement(1846552..1847874)
Genome browser
AA seq
440 aa
AA seq
DB search
MNTFQEIELIAPVQRALAEENYKTPTPIQAQTIPAALQGHDILGCAQTGTGKTAALALPI
LNRLGKNNRKAPPNRPFALVLAPTRELAIQIGESFETYGRHLRLRHVLVYGGVSQGNQVR
ALNRGAHVLIATPGRLLDLMNQGHINLEHLETFVLDEADRMLDMGFLPDLKRIISQLPAK
RQSLFFSATLAPKITELAQSLLKNPVSVNVTPKTTSVKKIKQQLMHVEYNKKQPLLQKIL
GSDGVERALVFIRTKRTANMLAQRLMRAGFKATAIHGNKSQNARQQALEAFRSKKVQVLV
ATDVAARGIDIDGITHVINFDLPVEAESYVHRIGRTGRAGAEGIAISFCSGNERNELRSI
EKLIGHKIPVSAEHRQSDVRPVKADLEPRTRKGAPGQRAGAKGARPPRRRSASSAAKAKP
KQGQKRTKWRHLKPNAKQTS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
ttgaatacttttcaagaaatcgaattaattgcgccagtccaacgtgcattggccgaagaa
aactacaaaacaccaacccccattcaggcacaaaccattcctgccgcactccagggacac
gatatcctcggctgtgctcaaaccggaaccggaaaaacagccgcactggcactgccgatt
cttaaccgtctggggaaaaacaatcgcaaagcgcccccgaatcgtccgtttgcactcgta
ttggcgcccacgcgggaactggcgattcaaattggcgaaagcttcgagacatacggtcgg
catctccgattgcggcatgttctcgtttatggtggcgtcagtcaggggaaccaggtacgg
gcattgaatcgaggcgcccacgttctgatcgcgacccccggacgtttactcgatttgatg
aaccaaggtcatatcaatctcgaacatctggaaacattcgtcctggacgaagccgaccgc
atgcttgatatgggttttcttcccgacctcaaacggatcatcagccaactgccggcaaaa
cgacagtcattgttcttttcagcaacactggcacccaagattaccgaactggcgcaaagc
ctgctgaaaaatccggtcagtgtcaacgtgacgcccaagaccaccagtgtgaaaaagatc
aagcaacaactgatgcacgtggaatacaacaaaaagcaaccgctcttacagaaaattctg
ggaagcgacggcgtcgaacgggcgctggttttcatccgaaccaaacgaacggccaacatg
ctggcccagcggctgatgcgggctggcttcaaagccaccgccatccacggcaataaatct
caaaacgcccggcagcaggctttagaagcattccgcagtaaaaaggtgcaggtgcttgtc
gcgaccgacgtcgccgcccggggaatcgacattgatggcatcacgcatgtaatcaacttc
gatcttcccgtggaagccgaatcctacgtgcatcgtatcggtcgaaccggacgcgccggc
gctgagggcattgccatttcgttctgcagtggtaacgaacggaatgaactgcgttccatt
gaaaagttgattggtcataaaataccggtctcagcggaacatcgtcagtcggacgtgcgg
cccgtcaaagctgacttggaaccccgcacccgcaaaggtgccccgggacaaagagcgggt
gccaaaggcgcacgcccacctcgacgccgttccgcttcatctgccgccaaagccaaacca
aaacagggacagaaacggaccaagtggcggcatctcaagccaaatgcaaaacaaaccagc
taa
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