Gimesia alba: Pan241w_20940
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Entry
Pan241w_20940 CDS
T09945
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gaz
Gimesia alba
Brite
KEGG Orthology (KO) [BR:
gaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaz03400
]
Pan241w_20940 (addB)
Enzymes [BR:
gaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pan241w_20940 (addB)
DNA repair and recombination proteins [BR:
gaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Pan241w_20940 (addB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
UvrD-helicase
UvrD_C
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QDT42013
UniProt:
A0A517RDS9
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All DBs
Position
2684075..2687452
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AA seq
1125 aa
AA seq
DB search
MQHEVQILIGTAGSGKTEHLLDRYRGALQSGQARHCPGTTLWLSPTIRSRRQILDQLLCK
EMPVCFAPNVFTFEAFAETILKSLDEPIQTLPEISKRYLLRTIVDDFIAAGKIQYFSSIA
GTTGFLDLVSSFISELKREEIWPEEFSEACGRLNSDSRQKDQELALIYDQYQIALHEMRR
YDSEGRFWSARTALQEGLWGPFGQFDLVVLDGFADFTHTQYEILELLARRTGQLLISLPL
EGELRRNDLFAKSVVAKRILESRLPGTIKTVCCTADGSQTSRRQISQSLFDNPRAIQPLP
TAEQIKVLAVAGQRNEVDVLASEVKQLLLQGVLPEEITIAFRSTLEYGDLIEETLTAAGI
PYFLGLEQEFSRFPVVRAIFAFLQIEIENWSFDSMMSILDSNYFSPDWPEYQEGAAVRCL
SRVLRQLKIDSGKTDLLNALEKESLRARELCTRYPEQAKWESLRSETEAANQLARRLADA
TQRLRGKEQFVTWIEILISLANEFGLQKAWQGADTEQDQLDQRDQFVWERFQKLLFHTVS
QIEQIEQFHQREAAPLDLIGFRGLLLDLLEQQTISLKPEETGRVRVLDAAQLRNLSIPYL
LIGGLSEASFPRSHREDCLYSEKDRGELNQNGLSLKQHANQQQEEMLLFYEVMTRFSKQL
ILSYPAISSTGQPLFPSPYLTALIDLFEPAALSVQQVGELNPLPRPEQTLSNRDLRVLST
NLLKQGQTGIFLNMLNDPALKQTALNILAASEMAIARFECEGFTEYEGILVSPQNRQAIH
ERFPREYEFSTTQLELFLACPYQFFTQSVLGIDVPEPPELRTNHLQRGIHVHSILTKLYE
LLIQQGATDQFYAADQVQALFLDLLDQRVSDELAETKLQQVLLTIEKQILEDWGALFAEQ
SETYGRLFDELWDDPPSIVGREVPFGRVPTEPDPTQTHYGHLTLGSGEHETRVQGQIDRI
DVGRMEGKKYFNIIDYKTGRALPSASEIRAGKKIQLALYLIAARRLEMIDIDAEPFHLGY
WKVQETGFVMPLRSRKKMVEPISGEDLELLETTMEGLVPHLAHLIRDGIFPVQVDEKIAH
LDPAFHSVCRFSQVESYRDSLGKQIDLLHGSETEEDRSEEGSPEK
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatgaagttcaaatcctgattggtacagcaggttccgggaaaacggaacattta
ctggaccggtaccggggggcattgcagtcagggcaggctcggcattgccccggaaccacg
ctctggctttcaccgacaatccgctcgcgacggcagatactggaccaattactctgtaaa
gagatgccggtctgttttgccccgaatgtttttacgtttgaagcgtttgccgagacgatt
ctcaagtctctggatgaaccgatccagaccctccccgagatctccaaacggtatttgttg
cggactatcgtggatgatttcatcgcagcggggaagattcagtatttcagttctattgca
gggacgaccggctttctggatctggtatccagtttcatttccgagttgaagcgggaagag
atctggccggaagagttttcagaagcctgcggacgactcaattcggattcgcggcagaag
gatcaggagctggcgctgatttatgatcagtatcagattgcgctgcatgagatgcggcgc
tatgactcagaggggcgtttctggtcggcaagaacggctttacaggagggcctgtggggg
ccctttggacaatttgatctggttgttctggatgggtttgccgactttacacatacacag
tatgaaattctggaactgctggcacgccggacaggccaacttttgatctcactccctctg
gaaggtgagttgcgacggaatgatttgtttgcgaaatcggtggtcgccaaacgaattctg
gaatctcgtttgccgggcacgatcaaaaccgtttgttgcacagccgatggttctcaaaca
tcgcggcggcagatcagccagtccttgtttgataatccacgtgcgattcaacctctgccg
accgccgagcaaatcaaagtgctggcggtggcaggacagcgaaacgaagtcgatgtgctg
gcatcggaagtgaagcagctgttactgcaaggggttctgccagaagagattaccatcgcg
ttccgttccacgctggagtatggcgacctgattgaagaaacattgacggcagccgggatt
ccttattttctcggtctggagcaggaattttcccggtttccggtggtgcgagcgatcttt
gcctttttgcagatcgaaattgagaactggtctttcgacagcatgatgtcgattctggac
tcgaattatttttcacccgactggccggaatatcaggagggagccgccgtccgatgtttg
tcgcgggtcttaagacagctcaagattgattccgggaagacggatcttctgaatgcactg
gaaaaagaaagtctgagagctcgcgaattgtgtacccgctatccggagcaggctaagtgg
gaatcacttcggagcgagacggaagccgcgaaccaacttgccaggcggcttgccgatgcg
actcagcggttgaggggcaaagagcagttcgtaacctggattgaaatcttgatttcactg
gcgaatgaatttggattgcagaaggcatggcagggagccgacaccgaacaggatcagctt
gatcagcgggatcaattcgtctgggaacggtttcagaaactattgtttcatacggtttcg
cagattgaacagatcgaacagtttcatcaacgggaagcggcaccgctcgatttaatcgga
tttcgagggctgctgctggacctgctcgaacagcaaactatctcactgaagccagaagag
acgggccgggttcgggttctggatgccgctcaattgagaaatttaagtattccctattta
ctgatcggtggtttaagcgaagccagttttccccggagccatcgagaagactgtctttac
agtgaaaaagaccgaggggaactgaatcagaacgggctttcactcaaacaacatgcgaat
cagcagcaggaagaaatgctgctgttttatgaagtgatgacccggttttccaaacagttg
attctgagctatccggccatcagttcaacagggcagcctctatttcccagcccttatctg
accgccttgattgatttgttcgaaccggcggctttatcggttcaacaggtaggcgagttg
aatccgctgccacgcccggagcagacattatcgaaccgtgatttacgggtgctgtcgaca
aatttgttaaagcaggggcagaccgggatctttctcaacatgttgaatgaccctgcgttg
aaacagaccgcactcaatattctggcggcgtccgaaatggcaatagcccgttttgagtgc
gagggctttacggagtatgaaggcatcctggtatcacctcaaaacaggcaggccatccat
gaacggtttccgcgggaatatgaattcagcaccacacaactggaactgtttttagcctgt
ccctatcagtttttcacgcagagtgtattgggaattgatgtccccgaaccaccggaactg
cggacgaatcatctacagcgcggtattcacgttcacagtattctgaccaagttgtatgaa
ctcctgattcagcagggagcgacagaccagttttacgccgcggatcaggtgcaagcttta
tttctggatctgcttgaccagcgggtttcggatgagctggcggagaccaagttgcagcag
gtgttgctaacgattgaaaaacaaattctggaagactggggggcgttgttcgcagaacag
tcggaaacatatggcaggctgtttgatgaactctgggatgatcctccgtcgattgtgggg
cgagaagtgccattcggcagggtgccgacagaaccggatcccacacagacccactatggg
catctgactttggggagtggagaacacgaaacccgcgttcaaggccagattgaccggatt
gatgtgggacgcatggaaggaaaaaaatatttcaacatcattgattataaaacagggcgc
gcgctgccttctgcttctgagattcgtgcggggaaaaaaattcagcttgccttgtatttg
atcgctgcccggcgactggaaatgattgacatcgatgcagagccgtttcatctgggatac
tggaaagttcaggagactgggtttgtaatgccgctacgatcccggaagaaaatggtagaa
ccgatatcgggcgaggacctggaattactggaaaccacaatggaagggctggtgcctcat
ttagcacacttgattcgcgatgggatttttccagtgcaggtggatgagaaaattgcgcat
ctcgatccggcatttcattccgtgtgccgtttctcgcaggtcgagagctaccgagattct
ctgggcaagcagatcgatttattgcacggttcagaaactgaagaggatcgttccgaagaa
ggttcaccagaaaagtaa
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