Gimesia alba: Pan241w_24820
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Entry
Pan241w_24820 CDS
T09945
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gaz
Gimesia alba
Pathway
gaz03030
DNA replication
gaz03430
Mismatch repair
gaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pan241w_24820 (dnaE)
03430 Mismatch repair
Pan241w_24820 (dnaE)
03440 Homologous recombination
Pan241w_24820 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaz03032
]
Pan241w_24820 (dnaE)
03400 DNA repair and recombination proteins [BR:
gaz03400
]
Pan241w_24820 (dnaE)
Enzymes [BR:
gaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pan241w_24820 (dnaE)
DNA replication proteins [BR:
gaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pan241w_24820 (dnaE)
DNA repair and recombination proteins [BR:
gaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pan241w_24820 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QDT42398
UniProt:
A0A517REU6
LinkDB
All DBs
Position
complement(3167925..3171440)
Genome browser
AA seq
1171 aa
AA seq
DB search
MSDPRPFAHLHCHTHFSMLDGASRIPEMVSKVKEAGMDSLAITDHGNLYGAMDFYQQCRS
QDVNPILGLEAYIAPRSRFEKGASRMKEASFHLTLLAQNRQGFENLIKLSSTSYLEGFYY
KPRIDKEILEAHSEGLILLTGCAAGELSHHILGENWEEAEKLCAWYEKVFGDRVYMEVQN
AGLEIQRQCLEGTVDLANKMGLPLVATNDAHYVDQKDAVAQDVLLCVSTRSVVSDEKRMK
MTGDQFFVRTQDEMYDAFPGLEHAVARTQELAERVDIQMSDKKFYPVFQPPDGMTDTQYL
RKLCEERLPLKYGDELTQAHWDRLHLELGVIEQMGYSSYFLIVWDFVQFAENEGIPCTAR
GSACGAIVAFLLGMSQVCPLKYDLLFERFLDPSRSEPPDIDIDFCRDRRQLVIDYTKQKY
GEKSVAQIGTFGTLKAKAAIRDVGRALGVPLARVNEIAKMIPDSLGIKLKDALTESPDLQ
TAYDQDSEVKQLLDLAMQLEGLCRSAGTHAAGVVVADLPLSEVVPLQTITGKTDIITQWD
GPTVESVGLLKMDFLGLRNLTILDKAVQNVKKHCGIDINPHKLPLDDKETFELLQRGETK
GIFQLESGGMRDLLTKMRPDKFEDIIATSALYRPGPLEGGMVMQYVDVKHNRIPIPKVHP
IVDEILDETYGVMVYQEQVMRILNRVGGIELSAAYRCIKAISKKKLKIIADFRDQYLAGA
KENDVDVKLATDLFEMIEKFAGYGFNKSHSTAYGGVAYATAYLKAHYPKEFMAALLSCGM
ESHERINEHVDDCRRMKIEVLPPDINHSDVEFSVEGEKIRFGMGAIKGVGEQVLEAVVED
REENGPFLNLYNLCERVDPKTLNKSTLEILIKAGALSSLGGNQAQLMLSVERAVQSALNI
HRDRARGQKSLFDDEPAADESGGAEETLLPEAEDWPRAQKLGAEKEVFGFYLTSHPLAEM
GTALTKYAQHQTNELAEMDDREEVILAGMVSSIKMAATKKPSKNGNTRYANFDLEDPHGL
VRCIMWPEQFASMGEKVKMEAMVIIKGKIDKRGREPNVIVDQLLTLNDARKQFTDRLAIN
FKRGVHTRQDMVNVHDVLTQYPGQTEVLLVVDSVDQEKPNTHLRYVLNPPGSMRVSCSNE
FENQLTAVIGESHIHFHTPIKKKNTGGSMGR
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacccacgcccttttgctcatctacattgtcatacccatttcagtatgctggat
ggggccagccgcatccctgaaatggtaagtaaagtcaaagaagccggcatggattcgctg
gcgatcaccgaccacggcaatctgtacggcgcgatggacttttaccagcagtgtcgcagt
caggatgtaaatccgatcttgggactggaagcgtatatcgccccccgcagccgcttcgaa
aaaggggcttcgcggatgaaagaggccagttttcacctgacattgctggcacagaatcgg
cagggctttgaaaatctaatcaaactttcttccacatcgtatctcgaaggcttttattac
aaaccccgtatcgacaaggaaatcctcgaagcccatagcgaaggcctgatcctgctcaca
ggctgtgcagcaggagaactgtcgcaccatatcctgggagaaaactgggaagaagcagaa
aagctctgcgcctggtacgaaaaagtatttggcgaccgggtttatatggaagtacagaat
gcggggctggagatccagcggcagtgcctggaaggaacagtcgatctggctaataaaatg
gggctgcctcttgtcgccaccaacgacgcccattatgtcgaccagaaagacgccgtcgcc
caagacgttctgctgtgtgtcagtacgcgctcagtcgtgagtgatgaaaaacggatgaaa
atgaccggcgatcagtttttcgtccgcacccaggatgaaatgtacgatgcctttccagga
ttggaacacgcggtcgcacgcacacaggaactggcggaacgggttgacattcagatgtca
gataaaaaattctacccggtcttccagccacctgacggcatgaccgatacgcaatacctg
cgcaaactctgtgaagagcgcctgccgctgaaatatggcgacgaactgacacaggcccac
tgggatcgactacacctcgaactgggtgtgattgagcaaatgggttattccagctacttc
ctgatcgtctgggacttcgtccagtttgcggaaaacgaaggaatcccctgtacggcccgt
ggttcggcctgtggggcaatcgtggccttcctgttgggaatgtcacaggtctgcccgctg
aaatatgacctgctgtttgaacgattcctggaccccagccgttcggaaccacccgatatc
gatatcgacttctgtcgcgaccgccgtcagttggtgatcgattacaccaaacaaaaatac
ggcgagaaaagtgtggcgcaaatcggcacgtttggtactctcaaagcgaaagccgccatt
cgagacgtcggacgcgcgctgggtgtcccgctggcacgtgtgaacgaaatcgccaagatg
attcctgactcactcggaatcaaactcaaggacgcgctcacagaaagtcccgatctgcaa
accgcctacgatcaggattcggaagtcaaacaactcctcgatctggcaatgcaactcgaa
ggcttatgccgtagtgccggtactcatgcggcgggggttgtggtcgccgacctgcctctc
tctgaagtcgtcccgctgcagaccattaccggcaagacagacatcatcacccagtgggat
ggccccaccgttgaatcggtgggcctgctcaagatggacttcctcggtttgcgcaacctg
acgattctggacaaagccgttcagaacgtaaaaaaacattgcggcatcgatatcaatcct
cacaagctgcctctggatgacaaggaaacgttcgaactcctgcagcggggagaaaccaaa
gggatcttccagttggaaagtggcgggatgcgtgacctactgaccaagatgcgtcccgac
aaattcgaagacatcatcgcgacctccgccttgtatcgcccgggacctctggaagggggg
atggtgatgcagtacgttgatgtaaagcacaaccggattccgatcccgaaagtgcatccg
attgtggatgaaattctggacgagacctacggcgtgatggtctaccaggaacaagtcatg
cggattctaaaccgtgtgggaggcatcgagctttcagccgcgtatcgctgtatcaaagcc
atcagtaagaaaaaactgaagatcatcgccgacttccgcgatcaatatctggcgggtgcc
aaagaaaacgatgtagacgtcaaactggcaaccgatctgttcgagatgatcgaaaaattt
gccggttacggatttaacaaatcgcactcgactgcctacggcggcgtggcttatgcgact
gcctatctcaaagcacattaccccaaagaattcatggcggcactcctttcctgcggaatg
gaaagtcacgagcgcatcaacgaacatgtcgatgactgccgccgcatgaaaattgaagta
ctgccccccgatatcaatcactcggacgtcgaattcagcgtcgaaggcgagaaaattcgt
ttcggtatgggagccatcaaaggggtcggcgaacaggtactggaagcggttgtcgaagat
cgtgaagagaacggaccattcctgaatctgtacaatctctgcgaacgggtcgaccccaaa
acgttgaataaaagtacgctcgaaattctgatcaaagcgggcgcgctcagcagcctggga
ggcaaccaggcacaattgatgctgtctgtcgagcgggccgtccagtcagccctgaatatt
catcgagaccgagcacgcgggcagaaaagtctctttgacgacgaacccgcggctgatgaa
tcaggcggcgctgaggaaacattattaccggaagcggaggattggcctcgtgcccagaaa
ctgggtgcggaaaaagaagtcttcggtttttacctcacatcacacccgctggccgaaatg
ggaactgcacttaccaagtatgcgcaacaccagacaaacgagctggcggagatggatgat
cgcgaagaagtcatcctggctggcatggtttcctcgatcaaaatggctgctaccaaaaag
ccaagcaagaacgggaatactcgttacgctaactttgacctcgaagacccccacggcctg
gttcgctgcatcatgtggcccgaacagttcgcatctatgggcgaaaaagtcaaaatggaa
gcgatggtgattatcaaaggaaaaattgataaacggggcagggaaccgaatgtgatcgtt
gatcagctgctgaccctgaatgatgcccgcaagcagttcaccgaccggctggccatcaat
tttaaacgcggtgttcacacacgccaggatatggtcaacgtgcatgatgtgctgacacag
tacccgggacagacagaagtccttctcgtcgttgattccgtcgaccaggagaaacccaat
acccacttgcgctatgttctgaatcctcccggcagcatgcgtgtttcctgcagtaatgaa
tttgaaaaccagctgacggctgtcatcggtgagagtcatattcacttccatactccgatt
aagaaaaaaaatacaggtggaagtatgggccgctaa
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integrated database retrieval system
