Gimesia alba: Pan241w_30640
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Entry
Pan241w_30640 CDS
T09945
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gaz
Gimesia alba
Pathway
gaz03410
Base excision repair
gaz03430
Mismatch repair
gaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pan241w_30640 (recJ)
03430 Mismatch repair
Pan241w_30640 (recJ)
03440 Homologous recombination
Pan241w_30640 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaz03400
]
Pan241w_30640 (recJ)
DNA repair and recombination proteins [BR:
gaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Pan241w_30640 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Pan241w_30640 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Pan241w_30640 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QDT42969
UniProt:
A0A517RGH1
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All DBs
Position
complement(3897547..3899310)
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AA seq
587 aa
AA seq
DB search
MTQKWRFAPHDESQIRGLSSEMRISPLLAQVLIARGLRDALSARSFIDARMSELLEPCSM
PGVEQAAERIIAALNEKRRITIYGDYDVDGMTATSILLQCITLANGQCDYFIPNRLDDGY
GLNCDAVRELYEEDPQRLLITVDCGITSVKEAALAKELGLELIITDHHQMGEAFPDADCL
VHPRLPDSNYEFPHLCGAGVALKLAWAVCQKLGDGQKASPKMREYLKCAVGLAAIGTIAD
VVPLLGENRILVRYGLGALAELAPLGLQELMKVAEIKSGQTLDTEDIGFALAPRLNAAGR
LGQARLAVELLTTNNQDRATQLAAYLDELNKNRRTVERRILKQAREMVEENEEWNDHPTL
VLAHQDWHPGVIGIVANRVAEHFEKPTVLIALDANSRTGQGSARSFAGFDLHAGFSSCAA
HLIRYGGHQAAAGLKIEEDKVNDFRLAFAEYAVSAPQPSDHDLQVRIDAEVCLNEITKQS
VRELDCLGPFGQENPRPQFVATRVELAEPPRTMGEGGRHLSLVFQQHNTKIRAIAFGKGE
WASQMEEDGGPFSISFAPGINRFRGFESVQLQLKDWVSEKSKTPVTS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaaaatggcgatttgctccccacgatgaatctcaaatacgcggcctcagttct
gaaatgcgcatctcaccgcttctggctcaggtcctgatagcgcgagggctgcgagacgca
ttgtctgcacggagttttattgatgcccggatgagcgagcttttggagccctgttccatg
ccaggtgtggaacaggcggcagagcgaatcattgcagcactcaatgagaagcgtcgaata
actatctacggcgactacgatgtggatggcatgactgccaccagcattttactgcaatgt
attactctggcgaatgggcagtgtgactatttcatccccaaccgtctggatgatggttat
ggtttgaactgcgacgctgttcgggagttatacgaagaggatccccagcggttactgatc
accgtggattgtggaatcaccagtgtgaaagaggcggcacttgccaaagaattaggcttg
gagctgattattaccgaccatcatcagatgggagaagcgtttccggatgcggattgcctg
gttcatccgcgtttaccagacagtaattatgaatttccgcatctatgtggtgccggggta
gccttgaagctggcctgggcagtttgtcaaaaactgggagatggtcagaaggcatctccc
aaaatgcgtgagtatttaaaatgtgccgtcggactggcagctattgggacgattgctgat
gtcgttcccttactgggcgaaaatcggattctcgtccgttatggattgggggctctcgct
gaacttgccccactgggcttacaggagttgatgaaagtcgcagagattaaatctggccaa
acgcttgataccgaagacattggtttcgcacttgcgccccgattgaatgcagcgggaaga
cttgggcaggcccgacttgctgtggaactgctgacaacaaataatcaggatcgcgccact
caattagccgcttatctggatgagttaaacaaaaaccgcagaaccgttgaacgccgaatt
ttgaagcaagcgcgagagatggtggaagagaatgaggagtggaatgaccaccctacatta
gttctggcacatcaggactggcatccgggagttatcggaattgtcgccaatcgagtggca
gaacatttcgaaaaaccaaccgtgttgattgccttggatgccaattctcgaaccggacag
gggtctgcacgatcatttgccggctttgatctgcatgccggcttctcatcctgtgccgcg
catttgatccgctatggtggtcaccaggctgcagctgggctcaaaattgaagaagacaaa
gtcaatgattttcggctagcatttgctgagtatgctgttagtgcgccccaaccatctgac
catgacctgcaggtacgcattgatgcagaagtttgcttgaatgagatcacaaaacaatcc
gtgcgggaactggattgtctggggccgttcggtcaagagaatccccggcctcaatttgtg
gcaacgcgtgttgaactggcagagcccccacgaactatgggagaaggggggcggcacctt
tccctggtctttcaacagcacaatacaaaaattcgagcgattgcatttggaaaaggggaa
tgggccagccagatggaagaggacggaggtccgttttcaatcagttttgcaccggggatc
aatcgctttcgcggctttgaaagtgtgcaactgcaattgaaagactgggtttctgaaaaa
tcaaaaaccccggtcacatcctga
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