KEGG   Gimesia alba: Pan241w_32770
Entry
Pan241w_32770     CDS       T09945                                 
Symbol
rhlE_2
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
gaz  Gimesia alba
Brite
KEGG Orthology (KO) [BR:gaz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gaz03400]
    Pan241w_32770 (rhlE_2)
Enzymes [BR:gaz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Pan241w_32770 (rhlE_2)
    5.6.2.6  RNA 3'-5' helicase
     Pan241w_32770 (rhlE_2)
DNA repair and recombination proteins [BR:gaz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Pan241w_32770 (rhlE_2)
SSDB
Motif
Pfam: DEAD_assoc DEAD WHD_Lhr WHD_4th_Lhr Helicase_C WHD_3rd_Lhr ResIII Cas3-like_C_2 AlkZ-like HTH_Crp_2 DEXQc_Suv3 WHD_CHMP7_1st
Other DBs
NCBI-ProteinID: QDT43178
UniProt: A0A517RH30
LinkDB
Position
4216048..4220637
AA seq 1529 aa
MSFYGYHPIIEKWFQNRFQGPTEPQQQGWPCINRGEHTLISAPTGSGKTLTAFLSVIDRL
VKRSLDGDLENEISVIYVSPLRALSNDMHRNLTEPLEEISQLLEEEDYTFTPIRVGLRTG
DTPSSKRTALVRRPPHILVTTPESLYLMLTGSKSRETLKTVETVIVDEIHALLRDKRGSH
WSLTLERLEALVDHPLQRIGLSATQKPLERVAQYLVGNRPEIEITDKPPQTERHEFPEQT
CRIVNIGHSRTLDVAIQVPPSELSAICTHEQWAEVLEQIVELIQLHHSTLIFVNTRRLAE
RITHQLTERLGEDVVGSHHGSLSAKIRHRTEQKLKSGELKAVIATASLELGIDVGYIDLV
VQIGSPRGIATFLQRIGRSGHSLGLVPKGRIFALSRDELLESMALVRSIKQGILDTVRMP
EAPVDILAQQITAEVACEEWNTDELFETMTRAYSYRNLKRSDFDSTLHFLSEGISTTAGR
SRVYLHHDQVQNRVRSRKNARLVSTMNGGAIPEIASYRVVTEDDQTVVGSVDEDFAVESM
AGDIFLLGNTSWQIRYVRGGDVTVVDANGAPPSIPFWFGEAPGRSLELSTEISHLREELE
RQVENPEQAILWLSQETNTDEWGSKQIVDYVLAEKAALGIVPTQKRIVFERFFDESGGMQ
LVIHAPFGGDINRAWGYTMRKRFCRSYNFELQATADDNGIILSLGPQHSFPLESLFTMLN
TRNVQQLSEQAILDHPMFHVRWRWNVTRALLVSRMQNGKKVPPPLQRFRAEDLLTAVFPR
LTGCPENEIGEIVRPDHILVDQTLYDCLNEQLDIDGFKTVLQEIEQGTVKLIPRDTREPS
PFCYELLNSSPYTFLDGGEAQERRARAVATRHTLSIESVEDLGRLSPEAIAQVCQEAQPL
VRNADEFHDLLLGRIHLPINEQPDWADWYQELEATGRATTLQRTENQSANRCTESWVATE
RLPAALAAFPESQHAPPVTVPVGVRQEWESAEARTAIIRGLLDTCGPLTVAEIANFAGMT
DSQTEAALMALEGEGIAMQGFFRVKDPNWDQSADESAPQQETTAADSPPKEWCHRRLLAR
IHRLTLQGLRAQVQPVDTSVFIQYLTRLHGMAGDEKRSGTNGLFEILSMLQGIDIPAICW
ERDILPARLSNYQNNQLDELCFTGEIGWGRLYPPKRTADQGKPMTGITRNAPVSFFLRED
IPWLTYFSESSTQNTEDQNYLSSPAVEIQELLTQQGALFATDLMAATESLPTQVADALGE
LISRGLVTSDSFSGMRQFTEDRSTKNRRAARKSRIGLVRKRSTPNNTGRWSIWRRELATE
IEERSLQYYEYVEQWAWQLLRRWGVVFRDLLVKESGAPRWFELLQIYRRLEARGEIRGGR
FVSGVAGEQFAMSGTIQELRKLRDESATDELTILSATDPLNLVGILTKQARIPSTANNRL
AYWNGSLIAYSRSEELFLLANVNEKTKRELILGFGLPIHGTNINETAATGSKPAIELQTQ
QSPAEDDMLIPTGDSSIKEEKKSPRPSFL
NT seq 4590 nt   +upstreamnt  +downstreamnt
atgtcattttacggatatcacccaatcattgaaaaatggtttcaaaatcgattccaggga
ccgacggaaccgcagcagcaaggctggccctgtattaatcgtggtgagcataccctgatt
tcagcccctaccggcagcggaaaaacattgaccgcgtttctgtccgtgatagatcgtctt
gtaaaacgttcgctggacggtgatctggagaatgaaatctcggtgatctatgtctctcca
ttacgggctctctcaaatgacatgcaccgcaatctgacagaacctctggaagaaatttcc
cagttactagaagaagaagactacactttcacccccattcgcgtcggcctgcgaacggga
gacaccccttcttcgaagcgaaccgcacttgtccgtcgtcctcctcatatcctggtcacc
actccggaatcgctgtatttaatgctgaccggctctaaaagtcgcgagacactcaaaacg
gtggaaaccgtgatcgtggatgaaattcacgccttgctacgagacaaacgcggctcacac
tggtcacttaccctggaacgtctggaagcattagtcgatcatcctctgcaacgaatcggc
ttgtcagccactcaaaaacctctagaacgggtggcacaatatctggtcggaaatcgaccg
gaaattgaaatcaccgacaagcccccccaaacagagcgccacgaatttcccgaacaaacc
tgccgcattgtcaacattggtcactcccgtactctggacgttgctatccaggttccccca
tccgaattgagcgcgatctgcactcacgagcaatgggccgaagttctggagcagatcgtc
gaactgattcagttgcaccacagcacattgatcttcgtcaacacacgaaggctggccgaa
cgcatcacccatcagttgacagagagactgggcgaagacgttgtcggcagccatcacggc
tcactctcggcaaaaattcggcatcgcaccgaacagaaattgaaaagtggcgagctcaaa
gcggttatcgcgaccgcttctctcgaactgggaatagatgtcggctacatcgatctggtt
gtgcagattggctcaccccgcggcattgctacctttctccagcgcatcggacgctcagga
cactcactcggtctggttcctaaaggacgcatctttgccctctcgcgggatgaactcctg
gaaagcatggcactggtccgatcaattaaacaaggcatcctcgataccgttcgcatgccg
gaagcccccgtcgatatcctggcacaacaaatcaccgccgaagtcgcctgtgaagaatgg
aacacagatgaattattcgaaacgatgacgcgcgcctattcttatcggaacctgaaacgg
tccgattttgatagcacgcttcattttctgagtgagggtatcagcaccacagccggtcgc
agtcgcgtctatttacatcacgatcaagtccagaaccgcgtccgcagcagaaaaaatgcc
cgtctcgtctccacgatgaacggaggtgcgattccggaaatcgcctcgtatcgcgtggtc
accgaagacgaccagaccgtggtcggctcagtcgacgaagactttgccgtggaaagcatg
gcgggagatattttcctgctcggcaatacatcctggcaaattcgctatgtccgaggcggc
gatgtcactgtagtcgatgctaatggcgcgcccccttccatcccgttctggtttggtgaa
gcaccagggcgctctctcgaactttcgaccgaaatctcacatctgcgcgaagaactcgaa
cggcaggtcgaaaacccggaacaagccattctctggctgagccaagaaaccaacacggac
gaatggggcagcaagcagattgtcgattacgttctggcagaaaaggccgcactgggcatt
gtcccgactcaaaagcgaatcgttttcgaacgcttcttcgatgaatcggggggcatgcaa
ctggtgatccacgctccctttggtggcgatatcaaccgcgcctggggctacaccatgcgt
aagcgtttctgccgttcctataattttgagctgcaggcaacggccgacgacaatggcatt
atcctctcacttggacctcaacacagctttcccttagagagcctatttacgatgttgaat
acaagaaacgttcaacaactttccgagcaggcgattttggatcaccccatgtttcatgtc
cgctggcgctggaatgtcacccgggcactgctggtttcgcggatgcagaacgggaagaaa
gtaccgccgccgctccaacgctttcgcgccgaggacctgctcactgccgtcttcccgcgt
ctgaccggctgtcccgaaaatgaaattggggaaatcgtccgccccgatcatattctggtc
gaccagactctctatgactgcttgaacgagcaactcgatatcgatggcttcaaaaccgtg
ctccaggaaatcgaacagggaaccgtcaaactgattccccgcgataccagagagccttct
cctttttgctacgaacttttgaactccagcccgtatacgtttctggatggtggcgaagca
caggaacgccgcgcccgtgcggtcgcaacacgccacacactttccatcgaaagtgtcgaa
gacctgggcagactctcccccgaagcaatcgcacaggtttgccaggaagcacaaccactg
gtacgaaacgccgatgaattccatgatcttctactgggccgcattcatcttcccattaat
gagcagccggactgggccgactggtatcaggaactggaagcaacgggccgtgcgacaaca
ctacaaagaacagagaatcaatcagcgaaccgctgcaccgaaagctgggtcgcaacagag
cgtctcccggcagcactggctgccttccccgagagtcagcatgcaccgcctgtcaccgtt
cctgttggtgtgcgtcaggaatgggaatcagcagaagcccgcactgccatcattcgcggt
ctactcgatacttgtggcccgttgaccgtcgcagaaatcgcaaacttcgcaggcatgacg
gattcacaaacagaagcggcgctgatggcgctcgaaggcgaaggcatcgcgatgcagggt
ttcttccgtgtcaaagatcccaactgggatcaaagcgccgatgagtcagccccccaacaa
gaaacaactgccgccgactcacctccgaaagagtggtgtcaccggcgtttgctggcacgc
attcacagactcaccctgcaaggtctgcgtgctcaagtgcaaccggtcgatacgagtgtc
ttcatccaatatctcacacggcttcacggcatggcgggcgacgaaaaacggtcgggaaca
aacggcctgtttgaaatcctctccatgctccagggaatcgacatcccggcgatttgctgg
gaacgcgacatactgccagcccgactttccaattaccagaataatcaattggatgaactc
tgttttacgggtgaaattggctggggacgcctctaccctcccaaacgaaccgccgatcag
ggcaaaccaatgaccggcattactcgtaatgcccccgtctctttctttttgagagaagat
atcccctggctgacatatttcagtgagtcttcaacgcagaataccgaagatcagaattat
ttgagcagcccggctgtggaaattcaggaactactcacgcaacagggggctctgttcgcc
accgacttaatggctgcaacagaatcccttcccacacaggtcgccgatgcattgggcgaa
ctcatctcgcgcgggttggtgacctccgacagtttctccggcatgcgacaatttaccgaa
gatcgttccacaaaaaaccgacgtgctgcacgaaaatcaagaatcggcctggtccgcaaa
cgcagcactccgaacaatacaggacgctggtcgatctggcgacgtgaacttgcgactgag
attgaagaacgcagcctgcaatattatgagtatgtcgagcaatgggcgtggcaactgtta
aggcgttggggagtggtcttccgcgacttattagtaaaagaatccggcgccccccgctgg
tttgaattgctgcagatttatcgacgtctcgaagcccggggtgaaattcgcggcggtcgt
ttcgtatctggagtcgcaggggaacaatttgcgatgtcgggaacaattcaggaattgcga
aagctccgtgatgaatcagcgaccgatgagctgacgattctttccgccaccgacccgttg
aatctcgtgggaatcttgacgaaacaggcgcgcatccccagcactgctaacaaccgtctc
gcttattggaatggaagtctgattgcctattcacggagcgaagaactgtttttactcgca
aacgtcaatgaaaaaacaaaacgcgaactgatcctgggatttgggctccccatccatgga
acgaatatcaatgaaacagccgctacaggttcaaaaccggcgatcgaactacaaacgcaa
cagtctcctgctgaagacgacatgctgattcccacaggagacagctctatcaaagaagag
aaaaagtcgccacgcccttcttttctctaa

DBGET integrated database retrieval system