Gimesia alba: Pan241w_40650
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Entry
Pan241w_40650 CDS
T09945
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
gaz
Gimesia alba
Brite
KEGG Orthology (KO) [BR:
gaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaz03032
]
Pan241w_40650 (ihfB)
03036 Chromosome and associated proteins [BR:
gaz03036
]
Pan241w_40650 (ihfB)
03400 DNA repair and recombination proteins [BR:
gaz03400
]
Pan241w_40650 (ihfB)
DNA replication proteins [BR:
gaz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Pan241w_40650 (ihfB)
Chromosome and associated proteins [BR:
gaz03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Pan241w_40650 (ihfB)
DNA repair and recombination proteins [BR:
gaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Pan241w_40650 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF4011
DUF1192
RNA_pol_Rpc34
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QDT43961
UniProt:
A0A517RJB2
LinkDB
All DBs
Position
5196164..5196622
Genome browser
AA seq
152 aa
AA seq
DB search
MTKKEIVKVISEEIGLTQLKTKEIVQKTFDAIVDTLVTDKRIELRNFGVFEVKKRAARKA
RNPRTGDRVDVEEKYVVTFKPGKEMEKRVRNLEEEAARLKAAASQPQASAPAASQPQQTP
PAAPQTPGSTPGTPQVGTYNNGSYPSGTQHTP
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaaaaaagagatagtcaaagtaatttcggaagagattggtctgacgcaactcaag
acaaaagagatcgtgcaaaaaacgtttgatgcgattgttgacactcttgtcactgacaag
cgcattgagctccgcaactttggcgtgtttgaagtcaaaaagcgagcagcacgaaaggca
aggaatcctcgcacaggagatcgtgtcgacgtagaagaaaaatacgtcgtaacgtttaag
cctggcaaggaaatggaaaagcgtgtgcgtaacctggaagaagaagctgcaagacttaag
gctgccgcttcacaacctcaggcgagtgctcctgcggcgtcacagccacagcagacacca
cctgcggctccacagactccaggttcaactccgggaaccccacaggtaggaacttacaat
aacggttcttatccttcgggaactcagcatacaccttaa
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