Gimesia alba: Pan241w_47830
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Entry
Pan241w_47830 CDS
T09945
Name
(GenBank) outer membrane porin HofQ
Organism
gaz
Gimesia alba
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
TPR_4
STN
TPR_12
TPR_11
Motif
Other DBs
NCBI-ProteinID:
QDT44668
UniProt:
A0A517RLB4
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Position
complement(6172852..6177906)
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AA seq
1684 aa
AA seq
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MMTPQNKHNQSWCSGLKEGPTLGKAFGVLACTTLIAASMWLANLGNTTRKVAADVEKDGQ
SIAGRQQRSARYYLSLGTQYYERGQFAEAVEVLEKASVSPGRLSSAEFRKMNDYLGRART
RAAAPRDKRIVRAQSPAADSNPVNLSSGAGKSLEEQKQLARQLLQSAREDIKLNELAKAR
QKAGQVASMRLEYGPFDVRPEQVLAAIARAEQRNNQSSPIQQAGGFSNRQSNVMQVAHVE
GSPENNPFSNPGANPFDGSQTKRLTEKEQASVLLKQARQALSAGNYDDARTLAIQAQDYD
VAYKLFEERPQHILAEIERKTGAKIFAGKSTSSMPIAQSGAPSSDNDLSAKLLKQARAEL
QSGNYDSARELALQASQMDVAYRLFDDRPELILDEIKRAQSGGSLAATGSSRAQTAPVAV
PQGSSKAQASELLRLARLDIKKRDFSNARQKVNQVQQMQVSYDLFDDRPELVLAAIDRIS
DEAAIISGIKGLQQNQDAVRPRINRLMEQAQLALQQGNKDEALMLASSAQKLAQTLDLRF
SNPNESPTAFIQRVGTSSETRLNPGTSKATDGKSNAEYARQLLASARKDLSNNRIEEARQ
KAEAAQKVDTAYTLFEDRPEQVLADIRKMAGQPGGLSPEELYAAENQRKKQFSQKLVAQA
RTDLKARRYEAARANAEEALQVGVQFKPGEDSPQAILRDLEARMGTQPTQVARMKQNDAS
EIAVIHPGASALELYNLGMQRLSEGNRGAAYQAFLAAYQSGEKLDNHRAQQLQDAVRELA
PSRADKIRLVKNQSESNGPVADSKEPSTIDLVEQKQAIEFSRLRSDVLNAIFKAERMREN
APTEALEIIDQTMSKVESSSLNKKSTATLIGSLQRTRESIDSFRKQVAPLEELKRRNQEV
EEHISQEIKTRIRVEQELAELVQKFNELIDQRRFAEAGVVAKQAKDLDPQNPVAVTMEWK
AKFIAREWSNNEMRDRKEQNVWNQLNDVEEALADAYTPDIKFGHDAKEWSDLKKRREKYH
AKNHSQKTEKEIQIEESLDRPVNLEFESESLANVMHRIQTLTGINIFLDGQGLEEEGVTT
DAPVTINVNGIKLRSALNLLLEPLNLSYTIDNEVLKITSRIRQQGTLSTETYPVADLVVP
IPNFAASGSMASNPYSQIGAVSYGSGIGGNQAAPGNFQVADPVMGGVPGSNPWSSGGATA
QVAGGGSNIDFDSLTELIVSTVEPDSWEEIGGAGSVRPFETTLSLVIRQTQKVHDEIANL
LDQLRRLQDLQVTIEVRFVTVSDRFFERIGVDFDFNVADTVGGPTVDSNGNPVPAFGQVD
LLSGANQGGGNNQGGQQGQQGQTTTTGQTGGQGVAPFSNPPTRTLLNFDNWPKSGTVVGM
ASPESFTPDLDVQFRQGSFEIGVPEFGSFNANAGVNVGLAILSDIEAFFFINAAQADERS
NLMFAPKVTLFNGQVAFVTSNVSRPFVISLVPTVGNFAVGFTPVIANIPEGVSLTVSAVI
SADRRYVRLSVNPNFTNVTDVFTFSFQGGTTGGQQGQQGQQGGQLGQQGGGNFGNGVGTG
VGGIGGVGGQGGQAGGQTGQQGQQGQQGQQGGGLGTTTIQQPVVEQVTVTTTVSVPDGGT
VLLGGVKRLREGRSMAGVPILNKLPYISRLFKNTGVGRETESLMMMVTPRIIIQEEEEEA
LLGY
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgatgactcctcaaaataaacataatcaaagttggtgttctggcttgaaggagggacct
acattgggcaaggcatttggagtactagcctgtacgacgctgatcgcagcgtcaatgtgg
ctggccaatcttggcaacacgaccaggaaggtcgctgctgatgtcgagaaggatggccag
tcgattgcggggcgtcaacaacgctcggctcgttactatctgagtctggggactcaatat
tacgagagaggacaattcgctgaagcggtagaagtgcttgaaaaagcttctgtctctcca
ggtcgtttgtcatctgcagagtttcgcaaaatgaacgactatcttggtcgtgctcgaacg
cgagctgcagcacctcgggacaaacggattgtcagagcacagtcacccgcggctgactct
aatccagtcaacttatcaagtggtgcaggaaagtctctcgaagagcagaagcaactggct
cgtcagttacttcaatctgcccgtgaggatattaagctcaatgaactggcaaaggctcgc
cagaaagcagggcaggtagcatcgatgagactggaatatggtccgttcgatgtacgacca
gaacaggtcctggctgctatcgctcgcgcagagcaacgaaataatcagtcttctccgatt
cagcaagccggtggtttttctaatcgtcaatcgaatgtgatgcaggttgcccacgtagaa
ggatctcctgaaaataatccattttcaaatccaggtgccaatccatttgatggaagtcag
acgaaaagactgacggaaaaagaacaggcttctgttttattgaagcaggcacgtcaagca
ttgagtgccggcaactatgatgatgcccgaaccctggccattcaggcacaggattatgat
gttgcttacaaactgttcgaagaacgtccgcagcatattctggctgaaatcgaacgaaaa
accggcgctaagatctttgctggtaaatcaacttcttctatgcccatcgcacaatcaggt
gctccctcttcagataatgatctgtctgctaaactgttgaagcaggcacgtgccgaatta
cagtcaggaaattatgattctgctcgtgaactggcactgcaagcaagtcaaatggatgtg
gcttaccgattgtttgatgatcgtccggaattgattcttgacgaaattaagcgtgctcag
tcgggtggttctctggcagcgactggctccagccgtgctcagaccgcgcctgtcgctgtt
ccccaggggtcatcaaaagcacaggcatccgagttactgcgtctggctcgtctggatatc
aaaaaacgtgatttcagcaatgcccgtcagaaagtcaatcaggttcagcaaatgcaggtt
tcttatgacctgttcgatgaccggcctgaactggtcctggcagccatcgatcggatttcc
gacgaagcagccatcatttcggggatcaaagggctgcagcaaaatcaagacgctgttcgt
ccacggatcaatcgtttaatggaacaggctcagctggctttacagcagggaaataaagac
gaagcgttaatgctcgcttcctctgctcagaaactggctcaaacacttgatcttcgcttt
tccaacccgaatgaatcgccaacggccttcattcaacgtgtgggaaccagctctgaaacc
agactgaacccgggtacttcaaaagcgactgacggaaaatcaaatgcagaatatgcacgg
caattgctggcttctgcccgaaaagatctttccaacaatcgaatcgaagaagcacgacaa
aaagcggaagccgctcaaaaagttgataccgcttatactttgtttgaagatcgtcctgaa
caggttctggcagacattcgtaaaatggcaggccaacctggtgggctttcacctgaagaa
ctttacgctgcagaaaatcagcgtaagaaacaattctcacaaaaactggttgctcaagcc
cgaacggatctgaaagccagacgctatgaagctgctcgtgcgaatgcagaggaagcattg
caggtcggcgtacaattcaagccgggtgaagacagcccgcaggcaatcctgcgtgatctg
gaagctcgaatggggacacaacccactcaagtcgcacgtatgaaacagaacgatgccagt
gagatcgccgtgatccatcctggtgcatctgctctggaactgtataacctcggaatgcaa
cggctttccgaaggtaatcgtggagccgcttatcaggcatttttagccgcctatcagtcg
ggtgaaaagctggataatcatcgtgctcagcaattgcaggatgccgttcgagaattggca
ccttcacgagctgataagatccgcctggtgaaaaatcagagtgagtcgaacggccctgtc
gcagactctaaagaacccagcacaattgatctggtagaacagaaacaggcgattgagttc
agccgcctgcgatctgatgtgctgaatgcgatcttcaaagcagaaagaatgcgtgagaac
gctcccaccgaagctttggaaattatcgatcagaccatgtccaaagtggaaagttccagt
ctgaataagaaatcgacagcgactctcatcgggtcactgcaacggactcgtgaatccatt
gattccttccgcaaacaggttgctcctctggaagaattgaagagacgcaaccaggaagtg
gaagaacatatctctcaggaaattaaaaccagaattcgggtggaacaggaacttgccgaa
ctggttcagaagtttaatgagctgattgatcagcgtcgctttgcggaagctggcgtggtt
gccaagcaggccaaagacctcgacccgcagaatccggtcgctgtcacaatggaatggaaa
gcaaaatttattgcacgcgagtggtctaataatgagatgcgtgatcgcaaagaacagaac
gtctggaatcaattgaacgatgtcgaagaagcactggcagatgcctatacgcctgacatc
aaattcggtcacgatgccaaagaatggtcagatcttaaaaaacgtcgtgaaaagtatcac
gctaaaaaccatagccagaagacagagaaagaaatccagattgaagaaagcctggaccgt
ccagtgaaccttgaatttgaaagtgaatcactggcaaacgtgatgcacagaattcagaca
ctcaccgggatcaatatcttcctggatggtcagggactggaagaggaaggcgtgacaact
gatgctcctgtgacgatcaacgtcaacggaatcaagctcagaagtgccttgaacctgctt
ctggaaccgctgaatctttcctacacgattgacaacgaagtattgaaaatcacgagccgc
attcggcagcagggaaccttgagcacagaaacctacccggtcgctgacctggtggtaccg
attcctaactttgcagccagcggcagtatggcaagtaacccttacagccagattggtgca
gtcagctatggttcaggaattggtggaaatcaggctgctcccggaaacttccaggttgca
gatcctgtaatgggtggtgtgcccggttccaatccctggagcagtggcggtgcgacagca
caagtcgccggtggtggttccaatatcgactttgattccttaaccgaactgattgtctct
accgtggaacccgattcctgggaagaaatcggcggtgccggaagtgtgcgtccttttgaa
accacattgagtctggtgattcgccaaacacaaaaagtgcacgacgaaattgctaacctg
ctcgatcagttgagaagactacaggacctgcaggtaacgattgaagttcgctttgtgact
gtctccgatcgattcttcgaacgaattggtgtcgacttcgacttcaatgtcgcagatacc
gttggtggtcctactgttgacagtaatggaaaccccgtgcccgcctttggtcaggtcgac
ctgctgagtggtgccaaccagggtggtggtaacaaccagggtggtcagcaaggacagcag
ggacaaacgacgacgaccggtcagaccggcggacagggagtcgctccctttagtaatccg
cctacgagaacgttgctcaacttcgataactggccaaaaagtggtacagtcgtcgggatg
gcttcgcccgaatcgtttacgccggacctcgacgttcagttccgccagggatcatttgaa
atcggtgttcctgaattcggaagtttcaatgcgaacgccggtgtgaatgttggtctggcc
attctgagtgacatcgaagccttcttcttcatcaatgctgctcaggcagatgaacgatca
aacctgatgtttgctccgaaagtgacgctcttcaacggacaggttgcctttgtgaccagt
aacgtatcacgacctttcgtgatcagtctggtgcctactgtgggtaacttcgctgtcggg
ttcacaccagtcatcgcgaatatccctgaaggggtctcactgactgtgtcagctgtgatc
tctgcagaccgacgttatgtacgactctccgtcaatccgaacttcaccaacgtgaccgac
gtgtttaccttctccttccaggggggcaccacaggtggtcagcaaggccagcaaggccag
caaggtggccagcttggtcagcagggtggtggaaactttggtaacggtgtcggaaccggt
gtcggtggtattggtggtgtcggcggccaaggtggccaagccggcggccagaccggtcag
caaggccagcaggggcaacaagggcagcagggtggtggcttgggaacaaccacgattcag
cagcctgttgtagaacaggtgactgtgacaaccacagtcagtgtacccgacggtggtact
gtgcttctgggtggtgtcaaacgactccgcgaaggacgtagcatggccggtgttccgatt
ttgaacaaactgccgtacatcagtcgactctttaagaatactggtgtcggtcgtgaaacc
gaaagtttgatgatgatggttacccccagaattatcattcaggaagaagaagaggaagct
ctcctcggatactaa
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