Gemmatirosa kalamazoonensis: J421_0149
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Entry
J421_0149 CDS
T03025
Name
(GenBank) HhH-GPD family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J421_0149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gba03400
]
J421_0149
Enzymes [BR:
gba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
J421_0149
DNA repair and recombination proteins [BR:
gba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J421_0149
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
FxSxx-COOH
DUF6039
Motif
Other DBs
NCBI-ProteinID:
AHG87686
UniProt:
W0RA86
LinkDB
All DBs
Position
complement(139205..139831)
Genome browser
AA seq
208 aa
AA seq
DB search
MPDYRRAITHLKRADPKLAAVIERVGPCRFAVRAEGTHFEAVARAIVFQQLSGKAAGTIH
KRFHGLFGDRCPEPGELLLAPDEDLRGVGLSRQKIGYLRDLADRVASGDVPLDDIDSLGD
EEVVAALTRVKGVGRWTAQMFLMFRLGRPDVLPELDLGVQKGIQLAYNKRALPTPKDVLR
IGAPWAPWRSVASWYLWRSLENGDGQGG
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgcccgactatcgccgcgcgattacccatctcaagcgagcggaccccaagctcgccgcc
gtcatcgagcgcgtcgggccgtgccggttcgccgtccgtgccgagggcacgcacttcgag
gccgtggctcgcgcgatcgtgttccagcagctctccgggaaggccgcggggacgatccac
aagcgcttccacggactgttcggcgaccggtgccccgagcccggcgagctgctcctcgcg
ccggacgaggatctgcgcggcgtggggctctcgcggcagaagatcggctacctccgcgac
ctcgccgaccgcgtcgcctcgggcgacgtgccgctcgacgacatcgactcgctcggcgac
gaggaggtggtcgccgcgctcacccgcgtgaagggtgtcggccgctggacggcgcagatg
ttcctcatgttccgactcggccgccccgacgtgctccccgagctcgacctcggcgtgcag
aaggggatccagctcgcgtacaacaagcgcgcgctccccacgccgaaggacgtgctccgc
atcggggcgccgtgggcgccgtggcgcagcgtcgcgtcgtggtacctctggcggagcctc
gagaatggcgacggccagggcggctga
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