Gemmatirosa kalamazoonensis: J421_0152
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Entry
J421_0152 CDS
T03025
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
gba
Gemmatirosa kalamazoonensis
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gba02000
]
J421_0152
Transporters [BR:
gba02000
]
Other transporters
Pores ion channels [TC:
1
]
J421_0152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarboxypepD_reg
Plug
CarbopepD_reg_2
EMC7_beta-sandw
fn3_3
SpaA
Ig_DR_A0283-like
DUF4198
Motif
Other DBs
NCBI-ProteinID:
AHG87689
UniProt:
W0R9D0
LinkDB
All DBs
Position
141244..143634
Genome browser
AA seq
796 aa
AA seq
DB search
MYRFVLPLLVAPSIAAAQQQPPALHAPHATPSARAATAGAIEGRVTSPKGEPLSDVMVVL
RNADGTPGVRGAQTDNDGRFVIPNVPAGSWTLVARRVGLAEATRTVTVDGGAQTVELTLA
EQATVVAPMVVSASKERQRRTESSATIDVVDGAEVRLARAAHPAQIMKRVPGVYVGQLSA
EGHNMAIRQPIGTKPLYLYLEDGIPTRATGFFNHNALYEVNLPQSGGIEVLKGPGTALYG
SDAIGGVINVLTRPAPTKPSGELSLEGGDGGYRRMLATAGNTWGANGLRTDLNLTDVSGA
GRRDDSPYHRYSGTVRWDHFGTVNARTVVTGSTIDQNDALSLDSLRWTARSTANRSPLAF
RKVRALRASTALEKESGATLVSVTPYARYDVLSILPNWQLSYDPQTYTTRNYSLGVLARV
RREIVPLKTKLIAGLDVDYSPGSFLAKQAILTKSGTGGAAIYQSYKDGATQYDYDVTYRS
ASPYVQAELSPLPTLHIDAGVRYDASGYLYDTHLAPVDTGAHRVPASTTRDYSRVSPKIG
ASWELSRAVALYGSYRTGFRAPSQGQLFTQGSALNTVDLKPVKVASWEGGVRGQVGRRLV
YQVAAYDMTLKDDIITFIDASARRIATNAGETRHKGIETSVGAALLPSLRLDVAQSVSSQ
KYVTWVPQAARAATSTKPAVAEVRYDGNTIEAAPRDLSNVLLTWSPAPLQGGRVAAEWTH
TGRYFTDAQNTHSYAGYDIVNLHANYVVRPNLELFGRMVNVTNAVYAEVVSFDAVQGQQF
TPGTPRTIYAGVRVGR
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgattcgttctcccgctgctcgtcgcgccgtcgatcgcggcggcgcagcagcag
cctcccgccctgcacgcaccgcacgcgacgccctccgcgcgcgccgcgaccgccggcgcg
atcgagggccgcgtcacctcgccgaagggcgagccgctgagcgacgtcatggtcgtcctg
cgcaacgccgacgggacccccggcgtgcgcggcgcgcagaccgacaacgacggccgcttc
gtcatcccgaacgtgcccgcggggagctggacgctcgtcgcgcgccgcgtggggctggcc
gaggcgacgcgcaccgtcaccgtcgacggcggcgcgcagacggtggagctcacgctcgcc
gagcaggcgacggtcgtcgcgccgatggtggtgagcgcgtcgaaggagcggcagcgccgc
accgagtcgtcggcgacgatcgacgtcgtggacggcgccgaggtgcgtctcgcgcgcgcc
gcgcaccccgcgcagatcatgaagcgcgtgcccggcgtctacgtcggccagctctcggcg
gaggggcacaacatggccatccgccagccgatcggcacgaagccgctctacctctacctc
gaggacggcatcccgacgcgcgcgacggggttcttcaaccacaacgcgctgtacgaggtg
aacctgccgcagagcggcggcatcgaggtgctgaaggggcccggcacggcgctctacggc
agcgacgcgatcggcggcgtgatcaacgtgctcacgcgccccgcgccgacgaagccgtcg
ggcgagctgtcgctcgagggcggcgacggcggctaccggcgcatgctggcgacggcgggc
aatacgtggggcgcgaacggcctccgcacggacctcaacctcaccgacgtctccggcgcc
ggacgccgcgacgactcgccgtaccaccgctactcgggcacggtgcgctgggaccacttc
ggcacggtgaacgcgcgcacggtggtcaccggctccacgatcgaccagaacgacgcgctg
tcgctcgacagcctgcggtggacggcgcgcagcacggcgaaccgcagcccgctcgcgttc
cgcaaggtgcgcgcgctgcgcgcgtcgacggccctcgagaaggagagcggcgcgacgctc
gtgagcgtgacgccgtacgcgcgctacgacgtgctgtcgatcctcccgaactggcagctc
tcgtacgacccgcagacgtacacgacgcgcaactattcgttgggcgtgctggcgcgcgtg
cgacgtgagatcgtgccgctcaagacgaagctcatcgccggcctggacgtcgactactcg
ccggggagcttcctcgcgaagcaggcgatcctcacgaagtcgggcacgggcggcgcggcg
atctaccagtcgtacaaggacggcgcgacgcagtacgactacgacgtgacgtaccgcagc
gcgtcgccgtacgtgcaggcggagctctcgccgctgccgaccctccacatcgacgccggc
gtgcgctacgacgcgtcgggctacctgtacgacacgcacctcgcgccggtggacacgggc
gcgcaccgcgtgccggcgagcacgacgcgcgactactcgcgcgtgagcccgaagatcggc
gcgagctgggagctgtcgcgggcggtcgcgctgtacggctcgtaccgcacgggcttccgc
gcgccgtcgcaggggcagctgttcacgcagggctccgcgctgaacacggtggacctcaag
ccggtgaaggtcgcgagctgggagggcggcgtacgcggacaggtcggccggcgcctcgtg
taccaggtcgcggcgtacgacatgacgctcaaggacgacatcatcacgttcatcgacgcg
agcgcgcggcggatcgcgacgaacgccggcgagacgcggcacaaggggatcgagacgagc
gtcggcgccgcgctgctaccgtcgctgcggctcgacgtggcgcagtcggtgtcgagccag
aagtacgtgacgtgggtgccgcaggccgcgcgcgccgcgacgtcgacgaagcccgcggtg
gccgaggtgcgctacgacggcaacacgatcgaggccgcgccgcgcgacctgtcgaacgtg
ctgctcacctggtcgccggcgccgctgcagggcggccgtgtggccgcggagtggacgcac
acgggacgctacttcacggacgcgcagaacacgcacagctacgccggctacgacatcgtg
aacctgcacgcgaactacgtcgtgcggccgaacctcgagctgttcgggcgcatggtgaac
gtgacgaacgccgtgtacgccgaggtggtgtcgttcgacgccgtgcaggggcagcagttc
acgccgggcacgccgcggaccatctatgccggcgtgcgggtcgggcgctga
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