Gemmatirosa kalamazoonensis: J421_0350
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Entry
J421_0350 CDS
T03025
Name
(GenBank) glycoside hydrolase family 28
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00040
Pentose and glucuronate interconversions
gba01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
J421_0350
Enzymes [BR:
gba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
J421_0350
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
AHG87887
UniProt:
W0RBQ5
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Position
381440..382807
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AA seq
455 aa
AA seq
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MPRFAVIAALATLVSPLGAQDTRTVAEPKIPPACATLDASLVPVGDTTLADADEGRLDTD
RIQRAIDGCAAGRAVVLKADGPRRAFLGGPLKLRPGVTLVVDSGAILFGSRDPEVYATSA
GSCGVRKEGARGCRPLIAVDRADHAGVMGGGTIDGRGWATMAGQTISWWDLAQQARTGPP
QQNPRMIQTNGSNDFTLYGITLRNSPNFHVVFDRGDGFTAWGVKIHTPSPNARNTDGIDP
AGATNVTITRSWILTGDDNVAIKGGSAKTTHVTVSHNHFYRGHGMSIGSETNAGVERVLV
TDLTVDGADNGLRIKSNASRGGLVSNVTYENVCIRKTKEPIFMDTHYSASPQTTGTLIPV
FRDIVLRNVRVLDAGRITLDGYDAERRLGITLDGVTFDDVATVKLKASHADVTLGAGGTN
LPIAGDDVKMTGPAVRKDAAAAPSCEGRFAPFPVR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtttcgccgtcatcgcagccctcgccacgctcgtctcaccgttaggcgcgcag
gacacgcgcaccgtcgccgagccgaagattccgccggcgtgcgccacgctcgacgcgtcg
ctcgtgcccgtgggcgacacgacgctcgccgacgccgacgagggaaggctcgacaccgac
cgcatccagcgcgcgatcgacggctgtgcggccgggcgcgccgtggtgctgaaggccgac
gggccgcggcgcgcgttcctcggcgggccgctcaaactgcggcccggcgtcacgctcgtc
gtcgactcgggcgcgatcctgttcggctcgcgcgatccggaggtgtacgcgacgtcggcg
gggagctgcggcgtgcggaaggagggcgctcgcggctgccgcccgctcatcgccgtcgac
agagccgaccacgcgggcgtgatgggcggcggcacgatcgacggccgcggctgggcgacg
atggcggggcagacgatctcgtggtgggacctcgcgcagcaggcgcgcaccggcccgccg
cagcagaacccgcgcatgatccagacgaacggatcgaacgacttcacgctctacggcatc
acgctccgcaactcgccgaacttccacgtcgtgttcgaccgtggcgacgggttcaccgcg
tggggcgtgaagatccacacgccgagcccgaacgcgcgcaacaccgacggcatcgacccc
gccggcgcgacgaacgtgacgatcacgcggagctggatcctgaccggcgacgacaacgtc
gcgatcaagggcggcagcgcgaagacgacgcacgtcaccgtgtcgcacaaccacttctac
cgcggccacggcatgtcgatcggcagcgagacgaacgccggcgtcgagcgcgtgctcgtc
accgacctcacggtcgacggcgccgacaacgggctgcgcatcaagtccaacgcgtcgcgc
ggcgggctcgtgtcgaacgtgacgtacgagaacgtgtgcatccggaagacgaaggagccg
atcttcatggacacgcactacagcgcctcgccgcagacgacgggcacgctgatcccggtg
ttccgcgacatcgtgctccgcaacgtgcgcgtgctcgatgccggccgcatcacgctcgac
ggctacgacgcggagcgccggctcgggatcacgctcgacggcgtgacgttcgacgacgtc
gcgacggtgaagctgaaggcgtcgcacgccgacgtgacgctcggcgccggcggcacgaac
ctgccgatcgcgggcgacgacgtgaagatgaccgggcccgccgtgcgcaaggacgccgcc
gcggctccgtcgtgcgagggacgcttcgcgccgttcccggtgcggtga
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