Gemmatirosa kalamazoonensis: J421_0743
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Entry
J421_0743 CDS
T03025
Name
(GenBank) ABC-type transporter, periplasmic subunit family 3
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
gba
Gemmatirosa kalamazoonensis
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gba01011
]
J421_0743
Enzymes [BR:
gba01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
J421_0743
Peptidoglycan biosynthesis and degradation proteins [BR:
gba01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
J421_0743
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
SLT_2
Motif
Other DBs
NCBI-ProteinID:
AHG88280
UniProt:
W0RD94
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All DBs
Position
846477..848024
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AA seq
515 aa
AA seq
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MRVLVPRVTVLAAIAAAALACSRSKAPSGDDSTGVLQPTPGLARTDAAHAGEVAGHDLPE
IKWRDTLTVLMPYNSTTYFLYKGEPMGYEYELLKAFAQAHHVVLKVVAIQKRDSLMRFLL
AGRGDLVAARLIPMEEDTGRVAFTRPLYHTEPVLVQRGAPPAVAERALPKSVDTALKAGP
AEPPTPTINVRARLVQRPSELAGQRVTVQKKAPYVPTLIELADSLTGDLQVVEVDSSAEA
LIRGVARGAIQYTVAEGNVAELQGSVYKNLVIRPVIGASKPVAWAVRREARQLRDSLNRW
IGDEKTRGVLDRLYKKYFIDARGFQTRLESRYLTSTTGTLSPYDELLRRYAPQIGWDWRL
LGSQAYQESRFNPRARSWAGATGLLQLMPSTARSLGVRVLTDPEQNVRGAVKYLQDLERH
WAKNVADSTERLKFVLASFNAGTGHVEDAQRLAEKHGDDPLKWAQVSYWLLQLSKTEYYD
DPVVKYGFCRGMEPVAYVTVILDRFDHYRQFVTTA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttctcgtgccccgcgtcaccgttctggcggcgatcgccgccgctgccctcgcg
tgcagccggagcaaggcgccgtcgggtgacgactcgaccggcgtcctacagcccacgccg
gggctcgcccgcaccgatgccgcacatgccggcgaggtcgcgggccacgacctgccggag
atcaagtggcgcgacacgctcacggtgctcatgccctacaactcgaccacgtacttcctg
tacaagggcgagccgatgggatacgagtacgagctgctgaaggcgttcgcgcaggcgcat
cacgtggtgctgaaggtcgtcgcgatccagaagcgcgactcgctcatgaggttcctgctc
gccgggcgcggcgatctcgtggcggcgcggctgatcccgatggaggaggacacgggacgc
gtcgcgttcacgcgcccgctgtaccacacggagcccgtgctcgtgcagcgcggcgcgccg
cccgccgtcgccgagcgcgcgctgccgaagtccgtcgacacggcgctgaaggccggtccc
gcggagccgccgacgccgacgatcaacgtgcgcgcgcggctcgtgcagcggccgtcggag
ctcgcgggccagcgcgtcaccgtgcagaagaaggcgccgtacgtgccgacgctcatcgag
ctcgccgacagcctcaccggcgacctgcaggtcgtggaggtggactcgtcggccgaggcg
ctcatccgcggcgtggcgcgcggcgcgatccagtacacggtggccgaggggaacgtcgcc
gagctgcagggctccgtgtacaagaacctcgtgatccgccccgtgatcggcgcgtcgaag
ccggtggcgtgggccgttaggcgcgaggcgcggcagctccgcgactcgttgaaccggtgg
atcggcgacgagaagacgcgcggggtgctcgaccggctgtacaagaagtacttcatcgac
gcgcggggcttccagacgcggctcgagagccgctacctcacctccacgaccggcacgctg
tcgccgtacgacgagctgctccgccgctacgcgccgcagatcgggtgggactggcggctg
ttaggctcgcaggcgtaccaggagtcgcggttcaacccgcgcgcgcggtcgtgggccggc
gcgacggggctgctgcagctcatgccgtccaccgcgcgatcgctcggcgtgcgcgtgctc
accgacccggagcagaacgtgcgcggcgcggtgaagtacctgcaggacctcgagcggcac
tgggcgaagaacgtcgccgactccacggagcggctcaagttcgtgctcgcgtcgttcaac
gccggcacgggacacgtggaggacgcgcagcgcctcgccgagaagcacggcgacgacccg
ctgaagtgggcgcaggtgtcgtactggctgctgcagctctcgaagaccgagtactacgac
gacccggtcgtgaagtacggcttctgccgcggcatggagccggtcgcgtacgtcaccgtg
atcctcgaccggttcgaccactaccggcagttcgtgactacggcgtga
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