Gemmatirosa kalamazoonensis: J421_1111 Help Entry J421_1111         CDS       T03025                                  Name (GenBank) excinuclease ABC, A subunit   KO K03701   excinuclease ABC subunit A Organism gba  Gemmatirosa kalamazoonensis Pathway gba03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:gba00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     J421_1111  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:gba03400]     J421_1111 DNA repair and recombination proteins [BR:gba03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      J421_1111   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       J421_1111 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrA_inter ABC_tran UvrA_DNA-bind SMC_N AAA_29 AAA_16 nSTAND1 AAA_25 DnaJ_CXXCXGXG RsgA_GTPase AAA_21 AAA_22 nSTAND3 AAA_23 ATPase T2SSE Motif Other DBs NCBI-ProteinID:  AHG88648 UniProt:  W0RGX3 LinkDB All DBs Position 1254404..1257292 Genome browser AA seq 962 aa AA seqDB search MKRNGKRPAPRTAISVQGARVHNLKNVSVEIPRDRLVVVTGLSGSGKSSLAFDTIYAEGQ RRYMESLSSFAKRFVAQVAKPDVDFVFGLSPVISIEQKTTGSNPRSTVGTMTDVASYLNL LFATVGEPHCPRTGEPAPSRSTSQIVESILSLPDGTEVELRAPVFRVYGEDLDVVLTEVR KKGCRRLIVDGVSVDLAEKMELDESAVRHMDAVVDRVVVAKRHEKSIKAAVAAALLVGDG LLSVHVVKGAAAAQTKRFHEAFSRRHHFAYGDIGPEWFQFNNPEAACRTCGGLGVDKLTH PELLVPDPTRSIRGGCFVKEAFRYNPDTWDGRLMYSMALALGFSLDTPWAALPESVRQAI LYGVGVDKIAVRTPPDAKTKREEHEGREVGFHGIARRIERHYRRYRQRGEGSAGMEAWLD RVMVEHTCPDCQGARLRATRLLWTVGGRTLHDVNRMHFDELHAFLGDVKPSGRGADAGRQ VLKEIRARLDVLRGIGLDYLSFDRRAGTLSGGESQRIRLSTQIGSGLMGMLYVLDEPSIG LHPKDNVKMIATLESLRDIGNTVIVVEHDEDTIRAADHVVEMGPGPGVHGGTVVVQGTID DVLACDASPTGQFLSGRRAIATPKKRRRGNGYALVVRGARENNLKAIDVVFPLGTLTAIT GASGSGKSTLVSDVLYKALWKRLVDTRTLPGAHDAVEGMERVHKVVSIDQSPIGRNSRSN PATYVGFYDAIRDLFTAAPLAVERGYKPGRFSFNVKGGRCEECQGEGVITTQLYFMPDVE VTCGACKGARFNAETLEVTLRGKTIDDVLNMSVEEGARFFEDDPAVGRKIDVLVDLGLGY LTLGQSATTLSGGEAQRVKIATELSRLQRAKHTVYILDEPTTGLHLADVERLLESLNRLV DVGHTVLLIEHHLDVIKTADHVIDLGPEGGHAGGEVVVTGTPEQVAACRASHTGRFLRAH LR NT seq 2889 nt NT seq  +upstreamnt  +downstreamnt gtgaaacgcaacggcaagcgccccgcgcctcgcaccgcgatctccgtgcagggcgcgcgc gtgcacaatctgaagaacgtctccgtcgagatcccgcgcgaccggctcgtcgtcgtcacc ggtctctccggatccggcaagtcgagcctcgcgttcgacaccatctacgccgagggacag cggcggtacatggagtcgctgtcgtcgttcgcgaagcggttcgtcgcgcaggtcgcgaag cccgacgtcgacttcgtgttcgggctctcgccggtcatctccatcgagcagaagaccacc gggagcaacccgcggtccaccgtcggcacgatgaccgacgtcgcgagctatctcaacctg ctgttcgcgaccgtcggcgagccgcactgcccgcgcacgggcgagcccgcgccgagtcgc agcacgagccagatcgtggagtcgatcctgtcgctccccgacggcacggaggtggagctg cgcgcgccggtgttccgcgtctacggcgaggacctcgacgtcgtgctcaccgaggtgcgc aagaagggctgccgtcgcctcatcgtcgacggcgtgtcggtggacctcgcggagaagatg gagctcgacgagagcgcggtgcggcacatggacgcggtggtggatcgcgtcgtcgtcgcg aagcgccacgagaagtcgatcaaggccgccgtcgccgcggcgctgctcgtcggcgacggg ctgctctcggtgcacgtcgtgaagggcgccgcggcggcgcagacgaagcgctttcacgag gcgttcagccgcaggcaccacttcgcgtacggcgacatcggccccgagtggttccagttc aacaaccccgaggccgcgtgccgcacctgcgggggcctcggcgtcgacaagctcacgcac cccgagctgctcgttcccgatcccacgcggtccatccgcggcggctgcttcgtgaaggag gcgttccgctacaaccccgacacgtgggacgggcgcctcatgtacagcatggcgctcgca ctgggcttctcgctcgacacgccgtgggcggcgctgccggaatccgttaggcaggcgatc ctctacggcgtcggcgtcgacaagatcgccgtgcgcacgccccccgacgcgaagaccaag cgcgaggagcacgagggccgcgaggtcggcttccacggcatcgcgcgccgcatcgagcgg cactaccggcgctatcgccagcgcggcgaggggagcgcgggcatggaagcgtggctcgac cgcgtgatggtggagcacacctgccccgactgtcagggcgcccggctgcgcgccacgcgg ctgctgtggaccgtcggcggccgcacgctgcacgacgtgaaccgcatgcacttcgacgag ctgcacgcgttcctcggcgacgtgaagccgagcggccgcggggccgacgcggggcggcag gtgctgaaggagatccgcgcgcggctcgacgtgctgcgcggcatcgggctggactacctc agcttcgatcgccgcgcgggcacgctgtcgggcggcgagtcgcagcgcatccgcctgtcg acgcagatcggctcggggctcatgggcatgctctacgtgctcgacgagccgagcatcggg ctgcacccgaaggacaacgtgaagatgatcgcgacgctggagagcctgcgcgacatcggc aacaccgtcatcgtcgtcgagcacgacgaggacaccatccgcgccgccgaccacgtcgtg gagatggggcccggccccggcgtgcacggcggcaccgtcgtcgtgcaggggacgatcgac gacgtgctcgcgtgcgacgcgtcgccgaccggacagttcctctcggggcgccgcgccatc gcgacgccgaagaagcggcggcgcgggaacggctacgcgctcgtcgtgcgcggcgcgcgc gagaacaacctgaaggcgatcgacgtcgtgtttccgttaggcacgctcaccgccatcacc ggcgcgagcggatccggcaagagcacgctcgtgagcgacgtgctgtacaaggcgctgtgg aagcggctcgtcgacacgcgcacgcttcccggcgcgcacgacgcggtggaggggatggag cgcgtgcacaaggtcgtcagcatcgaccagtcgccgatcggccgcaattcgcggtcgaac ccggcgacgtacgtcgggttctacgacgccatccgcgacctgttcaccgccgcgccgctc gccgtggagcgcggctacaagccggggcgcttcagcttcaacgtgaagggcggccgctgc gaggaatgccagggcgagggcgtcatcaccacgcagctctacttcatgcccgacgtggag gtcacgtgcggcgcgtgcaagggcgcgcggttcaacgccgagacgctcgaggtcacgctc cgcggcaagacgatcgacgacgtgctgaacatgtcggtcgaggagggggcgcgcttcttc gaggacgaccccgcggtgggccgcaagatcgacgtgctcgtggacctcgggctcggctac ctcacgttaggccagtcggccaccacgctctccggcggcgaggcgcagcgcgtgaagatc gccacggagctcagccggctgcagcgcgcgaagcacaccgtctacatcctcgacgagccg acgaccgggctgcacctggccgacgtggagcggctgctcgagtcgctgaaccgcctcgtc gacgtcggccacaccgtgctgctcatcgagcaccacctcgacgtcatcaagaccgcggac cacgtcatcgacctcggccccgagggggggcacgccggcggggaggtggtcgtgacgggg acgcccgagcaggtggcggcgtgccgggcgtcgcacaccgggcggttcctccgggcgcat ctgcgatag

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