Gemmatirosa kalamazoonensis: J421_1547
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Entry
J421_1547 CDS
T03025
Name
(GenBank) HhH-GPD family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J421_1547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gba03000
]
J421_1547
03400 DNA repair and recombination proteins [BR:
gba03400
]
J421_1547
Enzymes [BR:
gba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
J421_1547
Transcription factors [BR:
gba03000
]
Prokaryotic type
Helix-turn-helix
AraC family
J421_1547
DNA repair and recombination proteins [BR:
gba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J421_1547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
ADH_zinc_N_2
Motif
Other DBs
NCBI-ProteinID:
AHG89084
UniProt:
W0RD87
LinkDB
All DBs
Position
1758570..1759448
Genome browser
AA seq
292 aa
AA seq
DB search
MTATSRPLHLAAPDGFDFRWITGFLAPRAVPSIERVTDHAYVRVVRLPVHGPVRVTVRAN
GAALRAASDPALAPAVLRGIVTRMLDLGEDVTRFRAHVARDRALGPIVARHTAVRLPQLL
DPFEGLVRGLLGQQVSVRAASTIADRLVRLLGEPLGGDEPSVAFPSADAVADASVDTLRS
LGVPRTRAAALRACAAAVRDGRLRWDAVRAMPADEAQRALDDLPGVGPWTASYVRMRALG
DRDAFPAADLGVVKALARLGVAPADAERAAERWRPWRAYATVFLWTSLSDPV
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcaacgtctcggcccctgcacctcgccgcgccggacggcttcgacttccgctgg
atcaccggcttcctcgcgccgcgtgcggtgccgtcgatcgagcgcgtcacggaccacgcg
tacgtgcgcgtggtgcggctgccggtgcacgggccggtgcgcgtcaccgtgcgcgcgaac
ggcgcggccctccgcgcggcgtcggaccccgcgctggcgcccgccgtgctccgcggcatc
gtcacccgcatgctggacctcggcgaggacgtcacgcgcttccgcgcccacgtggcgagg
gaccgcgcgttaggcccgatcgtcgcgcgacacaccgccgtgcggctgccgcagctgctc
gacccgttcgaggggctcgtgcgcgggctgctcgggcagcaggtgagcgtgcgtgcggcg
agcaccatcgccgatcggctcgtccggctgctcggcgagccgttgggcggcgacgagccg
tcggtggcgttcccgagcgccgacgcggtcgccgacgcgtcggtcgacacgctgcgatcg
ttaggcgtcccgcgcacgcgcgccgccgcactgcgcgcgtgcgcggcggcggtgcgcgac
ggacggctgcgctgggacgccgtgcgcgcgatgccggccgacgaggcgcagcgcgcgctc
gacgacctcccgggcgtggggccgtggaccgcgtcgtacgtgcgcatgcgcgcgctcggc
gaccgcgacgcgttcccggcggcggacctcggcgtcgtgaaggcgctcgcgcggctcggc
gtcgcgcccgccgacgcggagcgcgcggccgagcggtggcggccgtggcgcgcgtacgcg
acggtgttcctgtggacctccctctccgacccggtgtga
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