Gemmatirosa kalamazoonensis: J421_1574
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Entry
J421_1574 CDS
T03025
Name
(GenBank) diguanylate cyclase
Organism
gba
Gemmatirosa kalamazoonensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GGDEF
HD_5
TPR_12
AAA_16
HD
TPR_MalT
TPR_2
TPR_1
TPR_10
AAA_22
TPR_8
NB-ARC
RPN7
DUF8739
ABC_tran
nSTAND_NTPase5
TPR_16
RsgA_GTPase
NACHT
HDOD
Phasin
AAA_18
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AHG89111
UniProt:
W0RE71
LinkDB
All DBs
Position
1779742..1784457
Genome browser
AA seq
1571 aa
AA seq
DB search
MDQGKSFDQLVEEGQAAERRGQRAQARERYELALHHLGTEADGHRASAVLRWIARTYQVD
ADMDSALDCIAAAIAVAEAWGDEAAAGHAINIEAVVRWQQGDLDEAERLYLVARARALRA
ADAKLAAMTAQNLGVIANIRGDFDEARKRYEASLNEYRALGLTKDVCVALNNLGLLHTHQ
RQWDAAERAFSEAVQITDLIGDYSARISLDVNLAEMWVGRGEYARAQQSVRHAMEFASRT
GDSASIGQATKLLGIIARDTGDLVDADEQFRRAAEIAVARQDLLLEAEVAREEADLARRQ
GRSRQVLQHLNRAHKLFTQLSARRDLADIDRRTGRLEDEFLQVARRWGESIEAKDRYTQG
HCKRVADLSCAIAAEAGFDERSLFWFRIGALLHDVGKLVIPEEVLNKPGKLSDEEWALMR
SHTTAGAEMLADIEFPWDVRPIVLSHHERWDGKGYPHGLKGDGIPLVARILCVADVYDAL
TSMRSYKRALSHDEAMDVMRQDVGTMFDPAVFTWFERVAQGWPERTRVASSSDDAEVPRE
PDSVAGPAAIDTDDLTRMPLRRAFRETAERVLEARRTTERAVSLLVIDIDHFKLVNDTFG
HLQGDDLLRMVADVIRVQTGPSDFVARYAGDEFVALLPGTKIEDAIVVGERLRASVEQMR
CPRRDGTDEPVRVTLSIGAATAPLHGDTLDALFAAADGALYSSKRRGRNAVSAASGSGSA
RDATLLLDTFVGRAGERQRLTRMLDASARGVPGAVAVVGEAGVGKSTLLRQLAPEVGVRA
GSLLVGRCLEADVRPPYGPWADVVAAIHATGLVPPRTWQELGRLVPALGDPTAPAGAPSP
NAKYALLHELEEFLTAAAAARPLVVILDDVQWADAETWDALEFLVPRLDHQRLLVCLTIR
SEDLPGEGEQRRMRLSRHECYAEIALGRLSREELEQWLRAVLGGQAPEAALVEHLAAHTE
GNPLFAVQTLRMLAEDGGLRFDDGAWRYTPAPDGALPTAVRDLLARRIGRLTDATREILT
VAAVFGARFDADLLVGASGRDENVVFDAIEEGVAATVLTPVDGRGPSAYGFTHGLLADVL
RRAGSPLRLRRVHERVARILETHTPEAVAEIAAHFDRAGCSADALRHALKAGERAEAVYA
YDAATACYEMAYRHARSLAEHADVQWRLAGLDEITGRIAEAEEKCNLVLSSYAAGASELG
LLSAAKRMRERLRMARGAPFTDVLRTCTMLLDAARTSGDRSEAVPLLLMIAQLHGRLGDG
AAAVRGAHEAIAEAERSGEPRLVAEAHMRLGSALLLASPADAIPHYTIALDGFTHVEDRR
SQGGCHINIGVAHDRSGDHSAAELSYATALDVGREVKAADLTALASTNLGVLLMKTGRFA
EAKARYEEALRLYTSTNNEPYRLTTLYNLAHLARERGDAAGATELYGAAKALAERLGQLD
VHVGAICGVGLAELALGQNAAAGAHFAEASELLAGREDAWFQCREVLEALGIRLELVRGR
RAVAVERLCTALGEAERHDQYAAVWLAAECAAGLREERDGVQQLLQKHAAQARKRGYAPL
LRRLEAASKPA
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
gtggaccaggggaagtcgttcgaccagctcgtggaggaagggcaggcggccgagcggcgt
ggccagcgcgcgcaggcgcgcgagcgctacgagctggcgctgcaccacctgggcacggag
gccgacggccaccgggcctccgcggtgctccgctggatcgcgcgcacctaccaggtcgac
gccgacatggactcggcgctcgactgcatcgccgccgccatcgccgtcgccgaggcgtgg
ggcgacgaggcggccgcggggcacgcgatcaacatcgaggccgtcgtccgctggcagcag
ggcgacctcgacgaggcggagcggctctacctcgtcgcgcgcgcgcgcgcgctgcgcgcg
gccgacgcgaagctcgccgccatgacggcgcagaacctcggcgtcatcgcgaacatccgc
ggcgacttcgacgaggcgcgcaagcggtacgaggcgagcctcaacgagtaccgcgcgctc
ggcctcacgaaggacgtctgcgtcgcgctgaacaacctcggcctcctccacacgcaccag
cgccagtgggacgccgccgagcgcgcgttcagcgaggcggtgcagatcaccgatctgatc
ggcgactactcggcgcgcatctcgctcgacgtgaacctcgccgagatgtgggtggggcgc
ggcgagtacgcgcgcgcgcagcagtcggtgcgccacgcgatggagttcgcgtcgcgcacc
ggcgacagcgcgtcgatcggccaggccaccaagctgttaggcatcatcgcccgcgacacg
ggcgacctggtggatgccgacgagcagttccgccgcgccgcggagatcgcggtcgcgcgg
caggacctgctgctcgaggccgaggtggcgcgcgaggaggcggatctcgcgcggcggcag
gggcgcagccgtcaggtgctgcagcacctcaaccgcgcgcacaagctgttcacgcagctc
agcgcccgccgcgatctcgccgacatcgaccgccgcaccggccggctcgaggacgagttc
ctccaggtcgcgcggcgctggggtgagtcgatcgaagcgaaggaccggtacacgcagggt
cactgcaagcgcgtcgccgacctctcctgcgccatcgcggcggaggcggggttcgacgag
cgctcgctgttctggttccgcatcggcgcgctgctgcacgacgtcggcaagctcgtgatc
ccggaagaggtgctgaacaagccgggcaagctctccgacgaggagtgggcgctcatgcgc
tcccacaccacggcgggcgccgagatgctggcggacatcgagttcccgtgggacgtgcgg
ccgatcgtgctgtcgcaccacgagcggtgggacggcaagggctatccgcacgggctgaag
ggcgacggcatcccgctcgtcgcgcgcatcctgtgcgtggccgacgtgtacgacgcgctg
acgtcgatgcgctcgtacaagcgcgcgctgtcgcacgacgaggcgatggacgtcatgcgc
caggacgtcgggacgatgttcgacccggcggtgttcacctggttcgagcgcgtggcgcag
gggtggcccgagcgcacgcgcgtcgcgtcgtcgtccgacgacgccgaggtgccgcgcgag
cccgattcggtggccggccccgccgccatcgacacggacgacctcacgcgcatgccgctg
cgccgcgcgttccgggagacggcggagcgcgtgctcgaggcgcggcgcacgacggagcgt
gcggtgtcgctgctcgtcatcgacatcgaccacttcaagctcgtgaacgacacgttcggc
cacctgcagggcgacgacctgctgcgcatggtggccgacgtgatccgcgtgcagacgggg
ccgagcgacttcgtggcgcggtacgcgggcgacgagttcgtcgcgctgctgccgggcacg
aagatcgaggacgcgatcgtcgtcggcgagcggctgcgcgcgagcgtggagcagatgcgc
tgcccgcggcgcgacggcaccgacgagccggtgcgcgtcacgctgtcgatcggcgccgcg
acggcgccgctgcacggcgacacgctcgacgcgctgttcgccgccgccgacggcgcgctg
tactcgtcgaagcggcgcggccgcaacgcggtcagcgccgcgagcggctcgggcagcgcg
cgcgacgcgacgctgctgctcgacacgttcgtcggccgtgccggcgagcgtcagcgcctc
acgcgcatgctggacgcgagcgcgcgcggcgtgcccggcgcggtggccgtcgtcggcgag
gccggcgtcggcaagtcgacgctgctgcgccagctcgcgcccgaagtcggcgtgcgcgcc
ggctcgctgctcgtcggccgctgtctcgaggcggacgtgcggccgccgtacggcccgtgg
gccgatgtcgtcgccgcgatccacgcgacggggctggtgccgccgcgcacgtggcaggag
ctggggcgcctcgtccccgcgctgggcgacccgaccgcgccggccggcgcgccgtcgccg
aacgcgaagtacgcgctgctgcacgagctcgaggagttcctcaccgcggccgccgcggcg
cgcccgctcgtcgtcatcctcgacgacgtgcagtgggcggacgcggagacgtgggacgcg
ctggagttcctcgtgccgcggctcgaccaccagcggctgctcgtctgcctcaccatccgc
tcggaggatctgccgggcgagggcgagcagcggcgcatgcggctgtcgcgccacgagtgc
tacgcggagattgcgttaggccggctgtcgcgggaggagctcgagcagtggctgcgcgcg
gtgctcggcggccaggcgccggaggcggcgctcgtcgagcacctcgcggcgcacaccgag
ggcaatccgctgttcgccgtgcagacgctgcgcatgctggccgaggacggcgggctgcgc
ttcgacgacggtgcatggcgctacacgccggcgcccgacggcgcgctcccgaccgcggtg
cgcgacctgctcgcgcgccgcatcggccggctcacggacgcgacgcgcgagatcctcacc
gtcgccgcggtgttcggcgcgcgcttcgacgcggatctcctcgtcggcgcgagcgggcgc
gacgagaacgtcgtcttcgacgcgatcgaggagggcgtcgccgcgacggtgctcacgccc
gtcgacgggcgcggcccgagcgcgtacgggttcacgcacgggctgctcgccgacgtgctg
cggcgcgcggggagcccgctgcggctgcggcgcgtgcacgagcgcgtggcgcgcatcctc
gagacgcacacgccggaggcggtggcggagatcgccgcgcacttcgaccgcgccggctgc
agcgcggacgcgctgcgccacgcgctgaaggccggcgagcgggcggaggcggtgtacgcg
tacgacgcggcgacggcgtgctacgagatggcgtatcgccacgcgcggtcgctcgccgag
cacgcggacgtgcagtggcgcctcgccggtctcgacgagatcacgggccgcatcgccgag
gcggaggagaagtgcaacctcgtgctgtcgtcgtacgcggcgggcgcgagcgagctcggt
ctgctgagcgccgcgaagcgcatgcgcgagcgactgcgcatggcgcgcggcgcgccgttc
accgacgtgctgcgcacgtgcacgatgctgctcgacgcggcgcgcacctcgggcgaccgc
agcgaggcggtgccgctgctgctcatgatcgcgcagctgcacggccggctcggcgacggc
gcggcggcggtgcgtggcgcgcacgaggcgatcgccgaggcggagcgcagcggcgagccg
cggctcgtggcggaggcgcacatgcgactcggctccgcgctgctgctcgcgtcgccggcc
gacgcgatcccgcactacacgatcgcgctcgacgggttcacgcacgtcgaggatcggcgc
agccagggcggctgtcacatcaacatcggcgtggcgcacgatcgctccggcgaccactcg
gcggccgagctgtcgtacgcgaccgcgctcgacgtcggccgcgaggtgaaggccgcggat
ctcaccgcgctcgcgtcgacgaacctcggcgtgctgctgatgaagacgggccgtttcgcc
gaggcgaaggcgcgctacgaggaggcgctgcggctgtacacgtcgacgaacaacgagccg
taccgcctgacgacgctctacaacctcgcgcacctcgcgcgcgagcgcggcgacgccgcc
ggcgcgacggagctctacggcgcggcgaaggcgctcgccgagcggctcggccagctcgac
gtgcacgtcggcgcgatctgcggcgtggggctcgcggagctcgcgctcggccagaacgcc
gcggccggcgcgcacttcgcggaagcgtcggagctgctcgcggggcgcgaggacgcgtgg
ttccagtgccgcgaggtgctcgaggcgttaggcatccgcctggagctcgtgcgcggccgg
cgcgcggtggcggtggagcggctgtgcaccgcgctcggcgaggcggagcggcacgaccag
tacgccgcggtgtggctcgcggccgagtgcgcggcggggctgcgcgaggagcgcgacggc
gtgcagcagctgctgcagaagcacgccgcgcaggcgcgcaagcgcgggtacgcgccgctg
ctgcggcggctggaagcggcctcgaagccggcctga
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