Gemmatirosa kalamazoonensis: J421_2063
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Entry
J421_2063 CDS
T03025
Name
(GenBank) endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J421_2063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gba03400
]
J421_2063
Enzymes [BR:
gba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
J421_2063
DNA repair and recombination proteins [BR:
gba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
J421_2063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AHG89600
UniProt:
W0RGY9
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All DBs
Position
2378189..2379088
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AA seq
299 aa
AA seq
DB search
MPTPKHLFGAHTPDSGGIAMAARRAGNAGMRALQLFTAIPKYYNEKVGVRPERVERFRDA
LAETSIAPEHVMAHAAYVLNVATPDTEKWERASAGLTKELERSAALGLGMVCFHPGAATD
GDRDAAVKRVATAMARAIETVDGDTRLLVENTAGAGTTIARTAEEIAGILGELPRAARAR
AGYGLDTCHLFASGYDIAADPMAFTTVLDTFERAIGEPPRFFHLNDSEGALGSNKDRHTL
LGDGAIGQEPFGWLLGDPRSRGVPLILETPQDAAPADDDATPDPNDVRMIRLLERLAGA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccccaaagcacctcttcggcgcgcacactcccgacagcggcggcatcgcgatg
gccgcgcgccgcgccggcaacgcgggcatgcgcgcgctgcagctcttcaccgcgatcccg
aagtactacaacgagaaggtcggcgtgcgccccgagcgcgtggagcggttccgcgacgcg
ctcgcggagacgtccatcgcgccggagcacgtcatggcgcacgccgcgtacgtgctgaac
gtcgcgacgccggacaccgagaagtgggagcgcgcgagcgcggggctcacgaaggagctg
gaacggtcggcggcgctcgggctggggatggtgtgcttccatcccggcgcggcgaccgac
ggcgaccgcgacgcggcggtgaagcgcgtggcgacggcgatggcgcgcgcgatcgagacg
gtcgatggcgacacgcggctgctcgtcgagaacaccgcgggggcgggcacgacgatcgcg
cgcacggcggaggagatcgcggggatcctcggtgagctgccgcgggcggcgcgcgcacgc
gcgggctacgggttggacacgtgccacctgttcgcgtcgggctacgacatcgccgccgac
ccgatggcgttcaccacggtgctcgacacgttcgagcgtgcgatcggcgagccgccgcgc
ttcttccacctcaatgacagcgagggcgcgctcggctcgaacaaggatcgccacacgctg
ctcggcgacggtgcgatcggacaggagccgttcgggtggctgctcggcgacccacgcagc
cgcggcgtgccgctgatcctcgagacgccgcaggacgcggcgccggccgacgacgatgcg
acgccggatcctaacgacgtgcgcatgatccgcctgctcgagcgcctcgccggtgcctga
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