Gemmatirosa kalamazoonensis: J421_2339
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Entry
J421_2339 CDS
T03025
Name
(GenBank) protein of unknown function DUF490
KO
K09800
translocation and assembly module TamB
Organism
gba
Gemmatirosa kalamazoonensis
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gba02000
]
J421_2339
Transporters [BR:
gba02000
]
Other transporters
Pores ion channels [TC:
1
]
J421_2339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF748
YhdP
AsmA
Motif
Other DBs
NCBI-ProteinID:
AHG89876
UniProt:
W0RGH0
LinkDB
All DBs
Position
2713839..2718680
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AA seq
1613 aa
AA seq
DB search
MATEQTPTPDHAHPSPPRPHARHTGRRVAAIVLGSLFALVVLAVVAVFVLTNTEWGHEQI
RRKLIATLNTGDRRVHVGRISGNLLKGLTLHDVAITDSSGAPFLKADSVHTGYQVRPFFS
KKIDLSHVQLWRPVLVLDRPPHGVWNWERIFPSDTTKKDTTTSTGFGSWIVLHDVHVYDG
DVTVRIPWNPDSSLAAASRDSAIKVALDTTSKFRLRVRQVPNGYQQVQYYRSLYGAFPTV
SLAQPGQKARLIAADSLRVIASPFRPPEATVTQAHGNIRLDADSLWFRNMQVWMPGSFAA
LSGSYGLKTGGLDISGDARPAALHDVRFLMPALPDSGIATSRFHVFMGGSDTSVFRFAGM
DLRSARTTVQGDLGFSFTPEVRIDTTDVRFAGLTTTMLEELVPAAKSPRPGTLTGRLKAD
GTLADLALDGDVTFDEPRSGRSRIVADGVVGASDGVVRARHLQVRLAPFQVALAKIYAPT
LPVGGTVTGRATVNGSTTSRLDVTGMDLTHADRGQISRLVGRAAVAMSGSPNAPPPIPPR
RTAGDGAAPVLASERERTRVRGRTGNPWFDVDVDARPLSLVTVGRFAPAIGLRGSARGPI
RLRGTMRDFAVTSALALNDGGRVSVVGRLGMGDVPTYDLRTRLELFNANAVVAKAPSTSI
TARADVSGRGSDPKTMVARLDADVSTTRIDTVAIDSSRARLRIAGGLLTVDTLAVRAPQT
RLDMLGTFGLVAGRSGELSYLAHVDSLAGLARYIPHLTGKVQPRPAILAERVAAARADST
RNAQRNQVRLAVGEATIPRIAVDTPQTIAKDSLAGAVYAAGVLRGNIEGFDARGRAGAVN
LVALGNAVQRARFAYAGNAIRTKQQTFAVAGVADSLLVGGFALDSIDVRASYREPGGNLQ
LAVWQNKGSDVSVRADYGIYPDRRELLFGRLVMRFDTTFWAGTHPSAVRWGQPGVEVENL
ELTNGYGGRIFVDGRLPTGGAANMRLQVENFQVADVVGLLQSDVPVRGLADVDASITGPL
TAPIIRATAALDSASFRGTALPSLAANIDYANRRLTGRAQARGSLLAALATAQGSRVAAT
QPDTGRTLLEVTGSLPINLALEGVTGPRLADDAPLVADFRADSLPLDLASRFTDAVAEVR
GSARGAGTVRGTIKKPEIAGQVNLVDAGFRVTAAGILMKDVNGALRLRGDTVVIDSIAGR
TDGRIALHGGIGIKTLSAPSFDLRVTADRATVLDNEIGRIKADAQIAAYGPFDGVFVSGG
ARVLGGVIYVPESDKKEVISSGDPTVFAVLDTTRLANKDLVEQQSPLLANLRTDVYVGVD
RDTWVRSREANVEVYSDGDLRVRMNRAQQAVVLDGIVNTDRGQYTFLSKRFQVKSGSATF
IGTQELDPNLQVVAEYEVPNGRPPLTVRILIGGTLTAPRISLESDAQPPIPQSDLLSYLA
FGSNTGQLLSLGSGSSVSSSSPNNGLVGTTAALARKQIASVATGVIVDQLESKAGRSLGA
DVFNITPVPGLPDEFAGGNLGGGLEQFVRGTQIEFGKYFNRQLYVAFQATPVFFEGTPPI
PGFVVQYRFAHLLGLQLESNWQPRYFLPPPSLSPQTIDPKNAFGLFLVRNWRF
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgaacagacgcccacgcccgaccacgcgcatccgtcgccgccacggccgcac
gcgcgccacaccggacgacgcgtggcggcgatcgtgctcggcagcctgttcgccctcgtc
gtgctcgcggtcgtcgccgtgttcgtgctcacgaacaccgagtggggacacgagcagatc
cgccggaagctcatcgcgacactcaacacgggcgaccggcgcgtccacgtggggcggatc
agcggcaacctgctgaaggggctcacgctgcacgacgtcgcgatcaccgactccagcggc
gcgccgttcctcaaggccgactcggtacacacgggctaccaggtgcggccgttcttctcg
aagaagatcgatctctcgcacgtgcagctgtggcgcccggtgctcgtgctcgaccggccg
ccgcacggcgtgtggaactgggagcgcatcttcccatccgacacgacgaagaaggacacc
acgacgtcgacgggcttcggcagctggatcgtcctgcacgacgtgcacgtgtacgacggc
gacgtgacggtgcgcatcccgtggaacccagactcgtcgctcgccgccgcgtcgcgcgac
agcgcgatcaaggtggcgctcgacacgacgtcgaagttccggctgcgcgtgcggcaggtg
cctaacggctaccagcaggtccagtactaccggtcgctctacggcgcgttcccgacggtg
agcctcgcgcagcccgggcagaaggcgcggctcatcgcggccgacagcctgcgcgtgatc
gcgtcgccgttccgaccgcccgaggcgacggtgacgcaggcgcacggcaacatccgcctc
gacgccgactcgctctggttccgcaacatgcaggtgtggatgcccggttcgttcgcggcg
ctgagcggcagctacgggctgaagaccggagggctcgacatctccggcgacgctcggccg
gcggcgctgcacgacgtgcgcttcctcatgccggcgctccccgacagcggcatcgcgacg
agccgcttccacgtcttcatgggcggcagcgacacgtcggtgttccgcttcgcgggcatg
gacctgcgctcggcgcgcacgacggtgcagggggacctcggcttcagcttcacccccgag
gtgcggatcgacacgacggacgtgcggttcgccggcctcacgacgacgatgctggaggag
ctcgtgccggcggcgaagtcgccgcgcccgggcacgctgaccggacggctgaaggccgac
ggcacgctcgccgacctcgcgctcgacggcgacgtgacgttcgacgagccgcgctcggga
cggtcgcgcatcgtcgccgacggcgtggtgggcgcgtccgacggcgtcgtgcgcgcccgg
cacctccaggtgcggctcgcgccgttccaggtggcgctcgcgaagatctacgcaccgacg
ctccccgtcggcggcacggtgacgggccgggcgacggtgaacggcagcaccacgtcgcgg
ctcgacgtcaccgggatggacctcacgcacgccgaccgcgggcagatctcgcgcctcgtc
ggccgcgccgccgtcgcgatgagcggctcgcctaacgcgccgcctcccatcccgccgcgt
cgcaccgcgggcgacggcgcggcgccggtgctcgcgagcgagcgggaacgcacgcgcgtg
cgcgggcgcaccggcaatccgtggttcgacgtcgacgtcgacgcgcggccgctgtcgctc
gtcacggtcgggcggttcgcgccggcgatcgggctgcgcggcagcgcgcgcgggccgatc
cggctgcggggcacgatgcgcgacttcgccgtgacgtcggcgctcgcgctgaacgacggc
ggccgcgtctcggtcgtcggccggctgggcatgggcgacgtgccgacgtacgatctgcgc
acgcgtctggagctgttcaacgcgaacgccgtcgtcgcgaaggcgccgagcacgtcgatc
accgcgcgggccgacgtgagcggccgcggcagcgacccgaagacgatggtcgcgcggctc
gacgccgacgtcagcacgacgcgcatcgacacggtggcgatcgacagctcgcgcgcccgg
ctgcgcatcgccggcgggctgctcacggtcgacacgctcgccgtgcgcgcgccgcagacg
cgcctcgacatgctcggcacgttcgggctcgtggcggggcgcagcggcgagctgtcgtac
ctcgcgcacgtcgactcgctcgccgggctcgcgcgctacatcccgcatctcaccggcaag
gtccagccgcgcccggcgatcctcgcggagcgcgtggcggccgcccgcgcggactccacg
cgcaacgcgcagcgcaaccaggtgcggctcgccgtcggcgaggcgaccatcccgcgcatc
gcggtggacacgccgcagacgatcgcgaaggactcgctcgccggcgcggtctacgccgcg
ggcgtgctgcgcggcaacatcgagggcttcgacgcgcgcggccgcgccggcgcggtgaac
ctcgtggcgctcggcaacgcggtgcagcgcgcgcggttcgcgtacgcgggcaacgccatc
cgcacgaagcagcagacgttcgccgtcgccggcgtcgccgactcgctcctcgtgggcggc
ttcgcgctcgactcgatcgacgtgcgcgcgtcgtaccgcgagccgggcggcaacctccag
ctcgcggtgtggcagaacaaggggagcgacgtgtcggtacgcgctgactacggcatctat
cccgaccgccgggagctgctgttcggccggctcgtcatgcgcttcgacaccacgttctgg
gccgggacgcacccgagcgccgtgcgatgggggcagccgggcgtcgaggtcgagaacctc
gagctgacgaacggctacggtggccgcatcttcgtcgacggtcgactgcccaccggcggc
gcggcgaacatgcggctgcaggtggagaacttccaggtcgccgacgtcgtggggctgctg
cagagcgacgtgccggtgcgcggcctcgccgacgtcgacgcgagcatcaccggcccgctc
acggcgccgatcatccgcgccaccgcggcgctcgacagcgcgagcttccgcggcaccgcg
ctgccgagcctcgccgcgaacatcgactacgcgaaccggcgcctcaccggccgcgcgcag
gcgcgcggcagtctgctcgccgcgctcgcgacggcgcaggggagccgcgtcgcggcgacg
cagccggacaccggacgcacgctgctcgaggtgacgggcagcctgccgatcaacctcgcg
ctcgagggcgtgacgggaccgcggctcgccgacgacgcgccgctcgtcgccgacttccgc
gccgactcgctgccgctcgacctcgcgtcgcgcttcaccgacgcggtggccgaggtgcgc
gggtcggcgcgcggcgcgggcacggtgcgcggcacgatcaagaagccggagatcgccggg
caggtgaacctcgtcgacgccgggttccgcgtgacggccgcggggatcctgatgaaggac
gtgaacggcgcgctgcggctcagaggcgacacggtcgtcatcgactccatcgccggccgc
accgatgggcgcatcgcgctgcacggcggcatcggcatcaagacgctgtccgcgccgtcg
ttcgacctgcgcgtcacggcggaccgcgcgacggtgctcgacaacgagatcggccgcatc
aaggccgacgcgcagatcgcggcgtacggtccgttcgacggcgtgttcgtgagcggcggc
gcgcgcgtgctcggtggcgtgatctacgtccccgagtcggacaagaaggaggtcatctcg
tccggcgatcccaccgtgttcgcggtgctcgacacgactcggctcgcgaacaaggacctc
gtcgagcagcagtcgccgctcctcgcgaacctgcgcaccgacgtgtacgtgggcgtcgat
cgcgacacgtgggtgcgctcgcgcgaggcgaacgtggaggtgtacagcgacggcgacctg
cgcgtgcgcatgaaccgcgcgcagcaggcggtcgtgctcgacggcatcgtgaacaccgac
cgcgggcagtacacgttcctgagcaagcgcttccaggtgaagagcggctcggccacgttc
atcggcacgcaggagctcgacccgaacctgcaggtggtggccgagtacgaggtgcccaac
ggccgcccgccgctcaccgtgcggatcctcatcggcggcacgctcaccgcaccgcgcatc
tcgctggagagcgacgcgcagccgccgatcccgcagtcggacctcctgagctacctcgcg
ttcgggagcaacacgggacagctgctgtcgttaggctccgggtcgagcgtgagctcgtcg
tcgccgaacaacggcctcgtgggcacgacggcggcgctcgcgcgcaagcagatcgcgagc
gtggcgacgggcgtcatcgtcgaccagctcgagagcaaggcggggcgatcgctcggcgcg
gacgtcttcaacatcacgccggtgcctgggctgcccgacgagttcgcgggcgggaacctc
ggcggtgggctcgagcagttcgtgcgcggcacgcagatcgagttcggcaagtacttcaac
cggcagctctacgtcgcgttccaggcgacgccggtgttcttcgaggggacgccgccgatc
ccgggcttcgtggtgcagtaccgcttcgcgcacctgttaggcctgcagctggagtcgaac
tggcagccgcgctacttcctgccgccgccgtcgctctcgccgcagacgatcgacccgaag
aacgcgttcgggctgttcctcgtcaggaactggcggttctga
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