Gemmatirosa kalamazoonensis: J421_2547
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Entry
J421_2547 CDS
T03025
Name
(GenBank) PAS sensor protein
Organism
gba
Gemmatirosa kalamazoonensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF_2
GAF
PAS_4
PAS
GAF_3
PAS_8
PAS_9
PAS_7
HATPase_c
HisKA
Diguanyl_cycl_sensor
PAS_3
Motif
Other DBs
NCBI-ProteinID:
AHG90084
UniProt:
W0RG47
LinkDB
All DBs
Position
2972324..2975452
Genome browser
AA seq
1042 aa
AA seq
DB search
MAAPSSPVDSLVVLQDALLAAGRAAELGEQLRVLATALATLAGGQTTIVVRDESLAAIRT
VQVRPAGGGVEDVPAADRSTIAAPVWRRWLRLLKARRAQLAAPGATGPVYALDLSDQWAR
SEFGQALAGLPPESTMGAAPTAERVGPAGLLVAPILARDGAVLATLVQELPDRWPPSPDV
VRAVELLGQQIGHHVAEARLAALAGRRAERLQRLQEAGAALTRSLDEGEIVRELAKQVSR
VVPADGIVVAHPDLESGVVRTALRLVRGLSRPRADQPLGAGPLAEAARSGETVRVDDYDP
SQSPLAAADDVVGDAGPAGSVLVMPMRVGTQLVGVVAVHAAAPRAYRAEDEELLRAVTAQ
AGTAIANARLFAESEAERRQSEALAEVARAVGGSLRFGEVLRLILRHTSALLKAGGACVA
LRRDDYLHIVAGVGAASLLSGVHVPAGASMMGRSMQDGRPYISNDVPQDEGYYAPLRRVA
PIEKAVLVPLVGAEGPIGVIVAINREADFTDLDARVLQRLADHVAVAIVNARLFEEVTSA
TREWKVAFDAVAAGLVVLDDQGRVRRCNQRAAELAGAPGPKALLGRGFRDALGIAPAGRP
SLDAPAFDVIDRALALGEEARDIVRAATRGVWLDVLASPHPDGGTVVTFHDVTADRERAA
ALARSEARYERLVESATDAIFTVDADGRITSVNHAVERATGREREDLIGERYDALLASAD
AREVAAELLAAALRGERVRREVRFLDAAGGAHTGSLVAAPIVEDAMVVGVLGVMRDVTDE
RRLSDQLMQREKLATVGRLVRGIAHELNNPLTSVLTLADLLVGDGAAPADDDEHTPDPAD
VRDAALAIRAEARRAARIMGKLHAFARQRAPERTSTDVNRVVLDALELRRYALRMQEVDI
DVDLDYELPVTWADANQLQQVFLQIVTASEQSLADVPAGSRRLALRTRRVGDAIEAAFVD
SGRGYSDERAARLLEPFGAGDDTEHDADLAVSSEIVRAHGGRIRVERVPDGGAAVVVELP
YVPPPALSADAGALPLGAAGDG
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggccgctccgtcgtcgcccgtcgattcgctcgtcgtcctgcaggacgcccttctcgcc
gccggccgcgccgcggagctcggcgagcagctgcgcgtgctcgcgaccgcgctcgcgacg
ctcgccggcggccagacgacgatcgtcgtgcgcgacgagtcgctcgccgcgatccgcacc
gtgcaggtccggcccgccgggggcggcgtcgaggacgtgcccgccgccgaccgatcgacg
atcgccgctcccgtgtggcggcggtggctccggctgctgaaggcgcggcgcgcgcagctc
gcggcgccgggcgccacgggtccggtctacgccctcgacctctccgaccagtgggcgcgc
agcgagttcggtcaggcgctggccggactgccgccggagagcaccatgggcgccgcgccg
acggcggagcgcgtcggccccgccgggctgctcgtcgcgccgatcctcgcgcgcgacggc
gcggtgctcgccacgctcgtgcaggagctgcccgaccggtggccgccctcacccgacgtg
gtgcgcgccgtggagctgctcggccagcagatcgggcaccacgtggcggaggcgcggctc
gccgcgctcgccgggcgccgcgccgagcggctgcagcggctgcaggaggccggggccgcg
ctcacccgctcgctcgacgagggcgagatcgtgcgcgagctggcgaagcaggtgagccgc
gtcgtccccgccgacggcatcgtcgtcgcgcacccggacctcgagagcggcgtggtgcgc
accgcgctgcgcctcgtgcgcgggctgtcgcgtccacgcgccgaccagccgttaggcgcg
ggcccgctcgccgaagcggcgcgcagcggcgagaccgtgcgcgtcgacgactacgatccg
tcgcagtcgccgctcgccgccgccgacgacgtggtcggcgacgcgggacccgccggctcg
gtgctcgtcatgccgatgcgcgtcggcacgcagctcgtcggcgtcgtcgccgtgcacgcc
gcggcgccgcgcgcgtatcgcgcggaggacgaggagctgctccgcgcggtgaccgcgcag
gccggcaccgcgatcgcgaacgcgcggctgttcgcggagagcgaggcggagcgtcgacag
agcgaggcgctcgccgaggtggcgcgcgcggtcggcggctcgctccgcttcggcgaggtg
ctgcgcctcatcctccgccacacgtcggcgctgctgaaggcgggcggcgcgtgcgtcgcg
ctgaggcgcgacgactacctgcacatcgtcgccggcgtcggcgcggcgagcctgctctcc
ggcgtgcacgtgccggcgggagcgagcatgatggggcgctcgatgcaggacggccgcccg
tacatctcgaacgatgtcccgcaggacgaaggctactacgcgccgctgcgccgggtcgcg
ccgatcgagaaggcggtgctcgtgccgctcgtcggcgccgaaggcccgatcggcgtgatc
gtcgccatcaaccgcgaggccgacttcaccgatctcgatgcgcgcgtgctgcagcggctc
gccgaccacgtcgccgtcgcgatcgtgaacgcgcgtctgttcgaggaggtcacgtcggcg
acgcgcgagtggaaggtcgccttcgacgcggtggcggcggggctcgtggtgctcgatgac
caggggcgcgtacggcgatgcaaccagcgcgcggcggagctggcgggcgcgcccggcccg
aaggcgctgctcggccgcggcttccgcgacgcgttgggcatcgcgcccgccggccgtccg
tcgctcgacgcgcccgcgttcgacgtcatcgaccgcgcgctggccctcggcgaggaggcg
cgcgacatcgtgcgcgcggccacgcgcggcgtgtggctcgacgtgctcgcctcgccgcac
cccgacggcggcacggtcgtgacgttccacgacgtcaccgccgaccgcgagcgcgccgcg
gccctcgcgcgctccgaggcgcgctacgagcgcctcgtcgagtccgcgaccgacgcgatc
ttcaccgtcgacgccgacgggcgcatcacgtcggtgaaccacgccgtggagcgcgcgacg
ggccgcgagcgcgaggatctcatcggcgagcggtacgacgcgctcctcgcgagcgccgac
gcgcgcgaggtggcggcggagctgctcgccgcggcgctgcgcggcgagcgtgtgcggcgc
gaggtgcgcttcctcgacgccgcgggcggcgcgcacaccgggtcgctcgtcgccgcgccg
atcgtcgaggacgcgatggtggtcggcgtgctcggcgtcatgcgcgacgtgaccgacgag
cgacggctctccgatcagctcatgcagcgcgagaagctcgcgacggtgggccgtctcgtg
cgcggcatcgcgcacgagctgaacaacccgctcacgagcgtgctgacgctcgccgacctg
ctcgtcggcgacggcgcggcgccggccgatgacgacgagcacacgcccgatcccgccgac
gtccgcgacgcggcgctcgccatccgcgccgaggcgcgccgcgcggcgcgcatcatgggg
aagctgcacgcgttcgcgcgtcagcgcgcgcccgagcgcacgagcaccgacgtgaatcgc
gtcgtgctcgacgcgctcgagctgcgccgctacgcgctgcgcatgcaggaggtcgacatc
gacgtggatctcgactacgagctgcccgtgacgtgggccgacgcgaaccagctccagcag
gtgttcctgcagatcgtcaccgcgtcggagcagtcgctcgccgacgtgcccgcgggcagc
cgccgcctcgcgctgcgcacgcgccgcgtcggcgacgcgatcgaggcggcgttcgtcgac
agcggacgcgggtacagcgacgagcgcgcggcacggctgctcgaaccgttcggcgcgggc
gacgacaccgagcacgacgccgacctcgcggtgtcgagcgagatcgtgcgcgcgcacggc
ggccgcatccgcgtggagcgcgtgcccgacggcggcgccgcggtggtcgtcgagctcccg
tacgtgccgcccccggcgctgagcgccgacgcgggcgcgctgccgttaggcgcggcgggc
gacgggtga
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